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Data from: Genome reannotation of the lizard Anolis carolinensis based on 14 adult and embryonic deep transcriptomes
负责人:
关键词:
Embryo;Gene;RNA-seq;lizard;vertebrate;transcriptome;Genome;annotation;Anolis carolinensis;Tissue-specific
DOI:
doi:10.5061/dryad.17bn1
摘要:
for comparison with other vertebrate genomes. The public databases of Ensembl and NCBI have provided a first generation gene annotation of the anole genome tha
Data from: De novo sequencing, assembly, and annotation of four threespine stickleback genomes based on microfluidic partitioned DNA libraries
负责人:
关键词:
genome assembly;Holocene;threespine stickleback;Gasterosteus aculeatus;gene annotation
DOI:
doi:10.5061/dryad.113j3h7
摘要:
r de novo gene annotation, these assemblies offer a resource enhancing genomic investigations in stickleback.
Data from: High quality whole genome sequence of an abundant Holarctic odontocete, the harbour porpoise (Phocoena phocoena)
负责人:
关键词:
annotation;whole genome;Phocoena phocoena
DOI:
doi:10.5061/dryad.vr021gq
摘要:
with the genome of the domestic cattle (Bos taurus). Our draft annotation comprises 22,154 predicted genes, which we further annotated through matches to the NCBI
Data from: Genome assembly and annotation of a Drosophila simulans strain from Madagascar
负责人:
关键词:
drosophila simulans;Bioinfomatics;insects;Transcriptomics;genomics;proteomics;Phyloinfomatics
DOI:
doi:10.5061/dryad.ng95t
摘要:
. The annotation of M252 provides a clear improvement with alternative splicing for 52% of the multiple-exon genes, UTRs for 70% of the genes, 225 novel genes
Data from: Optimisation of next generation sequencing transcriptome annotation for species lacking sequenced genomes
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.2v3h4
摘要:
e been studied in ecological contexts but lack a sequenced genome. However, the efficacy and accuracy of RNA-seq annotation methods using reference genomes from
Data from: Whole genome sequence resource of Indian Zaprionus indianus
负责人:
关键词:
agriculture pest;Zaprionus indianus;Whole genome sequence;invasive species;Illumina
DOI:
doi:10.5061/dryad.3393k
摘要:
ly. This is the first Indian Z. indianus whole genome (draft) submitted to the sequence repository with SRA reads. The details of methodology, assembly statisti
Data from: The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potat
负责人:
Aversano, Riccardo
关键词:
DOI:
doi:10.5061/dryad.gf52g00
摘要:
on in heterozygosity (1.5% versus 53 to 59%), and differences in genome sizes were mainly due to variations in intergenic sequence length. Gene annotation by ab initi
Data from: A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes
负责人:
关键词:
chromosomal-scale assembly;tandem-duplicated genes;teak;terpene synthases
DOI:
doi:10.5061/dryad.77b2422
摘要:
, we generated 17 near-complete pseudomolecules with one chromosome present as two chromosome arm scaffolds. Genome annotation yielded 31,168 genes encoding

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