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Data from: Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.5b568
- 摘要：
- , and gene duplications in individual homologs across the phylogeny. We found significant conflict throughout the phylogeny in both datasets and in particular al
Data from: Specialization of a polyphenism switch gene following serial duplications in Pristionchus nematodes
- 负责人：
- DOI：
- doi:10.5061/dryad.34h7v
- 摘要：
- fied as the product of lineage-specific duplications. Here, we infer the role of gene duplications in producing a switch gene. Using reverse genetic
Data from: Genome-scale phylogenetics: inferring the plant tree of life from 18,896 gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.7881
- 摘要：
- gene duplications and losses. Gene tree parsimony is a phylogenetic optimization criterion in which a species tree is selected that minimizes the number of gene duplications
Data from: Efficient exploration of the space of reconciled gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.pv6df
- 摘要：
- , with resp. 24%,59% and 46% percent reductions in the mean numbers of duplications, transfers and losses per gene family. The open source implementation of ALE
Data from: Recurrent gene co-amplification on Drosophila X and Y chromosomes
- 负责人：
- DOI：
- doi:10.5061/dryad.hr62h5f
- 摘要：
- gene duplications between X and Y sex chromosomes could have a widespread effect on genomic and evolutionary patterns, including the epigenetic regulati
Data from: Gene duplication and gene expression changes play a role in the evolution of candidate pollen feeding genes in Heliconius butterflies
- 负责人：
- DOI：
- doi:10.5061/dryad.8d724
- 摘要：
- ong the lineage leading to heliconiine butterflies, including two Heliconius-specific duplications. Luciferase-like genes also underwent duplicati
Data from: A Bayesian method for analyzing lateral gene transfer
- 负责人：
- 关键词：
- Lateral gene transfer Horizontal gene transfer Gene duplication Gene loss Phylogenetics Phylogenomics MCMC Bayesian Reconciliation
- DOI：
- doi:10.5061/dryad.f78r2
- 摘要：
- t can only handle putative orthologs and completely disregard gene duplications. Consequently, proposed LGT among specific gene families, and the rate of LGT in gene
Data from: The fire ant social supergene is characterized by extensive gene and transposable element copy number variation
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- DOI：
- doi:10.5061/dryad.8c06d2p
- 摘要：
- st that gene duplications may be an important factor leading to monogyne and polygyne ant societies.
Data from: Whole genome resequencing reveals extensive natural variation in the model green alga Chlamydomonas reinhardtii
- 负责人：
- DOI：
- doi:10.5061/dryad.1n0g6
- 摘要：
- of polymorphism consistent with their origin as the recombinant progeny of a diploid zygospore. Large duplications or amplifications are a prominent feature
Data from: Dissecting molecular evolution in the highly diverse plant clade Caryophyllales using transcriptome sequencing
- 负责人：
- DOI：
- doi:10.5061/dryad.33m48
- 摘要：
- approach, we recovered 10,960 homolog groups, where each was represented by at least eight ingroup taxa. By decomposing these homolog trees, and taking gene duplications
