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Data from: Telling the whole story in a 10,000-genome world
- 负责人：
- DOI：
- doi:10.5061/dryad.gf39c8dc
- 摘要：
- of microbial taxonomy when subsets of genomic data are so evidently in conflict with one another, and with the "canonical" molecular taxonomy.
Data from: Unsorted homology within locus and species trees
- 负责人：
- 关键词：
- Gene duplication and loss;homology;gene family;Species tree;Locus tree;incomplete lineage sorting
- DOI：
- doi:10.5061/dryad.87k57
- 摘要：
- ng multiple gene loci and/or multiple individuals per species. In general, genome-wide data sets not only have unveiled extensive phylogenomic incongruence (Jeffroy
Data from: Characterizing and comparing phylogenetic trait data from their normalized Laplacian spectrum
- 负责人：
- DOI：
- doi:10.5061/dryad.6fh81vd
- 摘要：
- the spectral density profile of trait data on a phylogenetic tree from the normalized graph Laplacian. We demonstrate on simulated data the utility
Data from: Comparing two classes of alpha diversities and their corresponding beta and (dis)similarity measures, with an application to the Formo
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.vn85pg1
- 摘要：
- relative abundance datasets for unequal assemblage sizes/weights, for any order q?0, has not been addressed in the literature. Here we propose non-mo
Data from: Molecular and morphological phylogenetic analysis of an insular radiation in Pacific black flies (Simulium)
- 负责人：
- DOI：
- doi:10.5061/dryad.618
- 摘要：
- tic signal among mitochondrial sequences, or 3) lineage sorting causing the mitochondrial data to track an incorrect evolutionary history, may be responsible.
Data from: Molecular systematics of the Canidae
- 负责人：
- DOI：
- doi:10.5061/dryad.799
- 摘要：
- clade. However, the homogeneity partition tests indicate significant heterogeneity between the two data sets.
Data from: Low-parameter phylogenetic inference under the general Markov model
- 负责人：
- DOI：
- doi:10.5061/dryad.2k9j0
- 摘要：
- ngst species. However, the GM model assumes constant rates across sites, so the squangles should be confounded by data generated with invariant sites
Data from: Analysis of phylogenomic datasets reveals conflict, concordance, and gene duplications with examples from animals and plants
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.5b568
- 摘要：
- to resolve recalcitrant nodes with increasing amounts of data. The large size and complexity of these datasets introduce significant phylogenetic noise
Data from: Phylogeny of digitaria sections Trichachne and Trichophorae (Poaceae, Panicoideae, Paniceae): a morphological and molecular analysis. Ne
- 负责人：
- DOI：
- doi:10.5061/dryad.8h03j
- 摘要：
- rphology) and molecular data. A phylogenetic analysis was performed using 121 morphological characters and ITS sequences of 22 species and one variety of Digitaria plus thr
Data from: Robustness of predictions of extremely thermally stable proteins in ancient organisms
- 负责人：
- DOI：
- doi:10.5061/dryad.mv185
- 摘要：
- quences of nucleoside diphosphate kinases using a homogeneous model and then empirically resurrected the ancestral proteins. The thermal stabilities of these ancestral proteins wer
