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Data from: The availability of research data declines rapidly with article age
- 负责人:
- DOI:
- doi:10.5061/dryad.q3g37
- 摘要:
- research data changes with time since publication. We therefore requested datasets from a relatively homogenous set of 516 articles published between 2 and 22 yea
Data from: Reassessment of Homology of Morphological Characters in Tetractinellid Sponges Based on Molecular Data
- 负责人:
- DOI:
- doi:10.5061/dryad.106
- 摘要:
- comparable to that of vertebrates. One data set is derived from adult morphology and the two molecular data sets are from 12S ribosomal RNA and cytochrome b
Data from: Phylogeny of Lichen- and Non-Lichen-Forming Omphalinoid Mushrooms and the Utility of Testing for Combinability among Multiple Data Sets
- 负责人:
- DOI:
- doi:10.5061/dryad.778
- 摘要:
- four data sets suggested that they could not be combined in their entirety. The removal of ambiguous alignments and saturated sites was sufficient, aft
Data from: Failure of the ILD to determine data combinability for slow loris phylogeny
- 负责人:
- DOI:
- doi:10.5061/dryad.656
- 摘要:
- and two unlinked molecular data sets, the mitochondrial cytochrome b gene and the nuclear interphotoreceptor retinoid binding protein (exon 1), are analyzed with var
Data from: Weighted quartets phylogenetics
- 负责人:
- 关键词:
- Weighted Tree Similarity;Weighted Quartet Trees;phylogenetic reconstruction;Supertree Reconstruction
- DOI:
- doi:10.5061/dryad.r9k57
- 摘要:
- Despite impressive technical and theoretical developments, reconstruction of phylogenetic trees for enormous quantities of molecular data is sti
Data from: Mitochondrial phylogenomics of early land plants: mitigating the effects of saturation, compositional heterogeneity, and codon-usage bias
- 负责人:
- DOI:
- doi:10.5061/dryad.7b470
- 摘要:
- other streptophytes (land plants plus algal outgroups), compiling a data matrix of 60 taxa and 41 mitochondrial genes. Homogeneous analyse
Data from: Mining the Mammalian Genome for Artiodactyl Systematics
- 负责人:
- DOI:
- doi:10.5061/dryad.653
- 摘要:
- phylogenies largely congruent with the topology from the combined data set. In sharp contrast to the nuclear DNA data, the mtDNA cytochrome b sequence data sh
Data from: Morphology, molecules, and the phylogenetics of cetaceans
- 负责人:
- DOI:
- doi:10.5061/dryad.62
- 摘要:
- ). We reexamined this issue in light of a morphological data set composed of 207 characters and molecular data sets of published 12S, 16S, and cytochrome b
Data from: Who let the CAT out of the bag? accurately dealing with substitutional heterogeneity in phylogenomic analyses
- 负责人:
- DOI:
- doi:10.5061/dryad.85b2m
- 摘要:
- approaches for handling substitutional heterogeneity such as data partitioning with site-homogeneous substitution models. We simulated amino acid sequence dataset
Data from: The relative importance of modeling site pattern heterogeneity versus partition-wise heterotachy in phylogenomic inference
- 负责人:
- DOI:
- doi:10.5061/dryad.68qt629
- 摘要:
- ty in simulating topologies over genes. For an empirical Microsporidia test data set, all but one tested site-heterogeneous models (with or without partitioning