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Data from: A non-lethal sampling method to obtain, generate and assemble whole-blood transcriptomes from small, wild mammals
负责人:
关键词:
conservation genetics;Genomics\/Proteomics;Mammals;Disease Biology;Conservation Biology;Ecological Genetics
DOI:
doi:10.5061/dryad.p760b
摘要:
but not required enabling the use of smaller amounts of starting RNA. A large proportion of protein-coding genes (61%) in the genome were expressed in the blood
Data from: The genomic landscape of ribosomal peptides containing thiazole and oxazole heterocycles
负责人:
关键词:
Natural products;thiazole;ribosomal peptide;secondary metabolites.;post-translational modification;Genome mining;oxazole
DOI:
doi:10.5061/dryad.7q830
摘要:
genome sequences has illuminated several unexplored TOMM producers. Methods: All YcaO domain-containing proteins (D protein) and the surrounding genomic regions wer
Data from: The landscape of realized homologous recombination in pathogenic bacteria
负责人:
关键词:
DOI:
doi:10.5061/dryad.7t06c
摘要:
e genes with “housekeeping” functions tend to be overrepresented in cold regions. For example, ribosomal proteins showed low recombination in al
Data from: Evolution and diversification of the organellar release factor family
负责人:
关键词:
plastid;Eukaryota;translation termination;Evolution;release factor;genetic code;Mitochondrion
DOI:
doi:10.5061/dryad.2br48
摘要:
Translation termination is accomplished by proteins of the Class I release factor family (RF) that recognize stop codons and catalyze the ribosomal
Data from: Stress response or beneficial temperature acclimation: transcriptomic signatures in Antarctic fish (Pachycara brachycephalum)
负责人:
关键词:
cold-adaptation;Pachycara brachycephalum;microarray;Gene Regulation;chronic thermal exposure;ESTs;cDNA library
DOI:
doi:10.5061/dryad.40rk0
摘要:
was accompanied by the transcriptomic activation of differential protein degradation pathways, from proteasome-based degradation in the cold towards lysosomal protein
Data from: A new promising phylogenetic marker to study the diversity of fungal communities: the Glycoside Hydrolase 63 gene
负责人:
关键词:
Fungi;DNA Barcoding;diversity;single-copy gene;Fungi;DNA Barcoding;diversity;glycoside Hydrolase 63;phylogeny;phylogeny;Glycoside Hydrolase
DOI:
doi:10.5061/dryad.2p57p
摘要:
so a promising phylogenetic marker. Finally, a very high proportion of GH63 proteins was predicted to be secreted. This molecular tool could be a new phylogenetic ma
Data from: Nearly complete rRNA genes from 371 Animalia: updated structure-based alignment and phylogenetic analysis
负责人:
Mallatt, Jon M.
关键词:
28S rRNA 18S rRNA Ribosomal rRNA genes alignment secondary structure PHASE program
DOI:
doi:10.5061/dryad.1v62kr3q
摘要:
-compositional heterogeneity, and from combining rRNA with protein-coding genes in phylogenetic reconstruction.
Data from: The effects of model choice and mitigating bias on the ribosomal tree of life
负责人:
关键词:
Trichoplax adhaerens;Cyanophora paradoxa;Desulfurispirillum indicum;Chlamydomonas reinhardtii;Bigelowiella natans;Cenarchaeum symbiosum;Cryptosporidium muris;Zymomonas mobilis;Nitrosoarchaeum limnia;Lactobacillus fermentum;Aspergillus flavus;Oscillibacter valericigenes;Arachnula sp;Archaeoglobus fulgidus;single-matrix model;Thermoplasma acidophilum;Paenibacillus sp;Perkinsus marinus;Corynebacterium pseudotuberculosis;Natromonas pharaonis;Staphylothermus marinus;two-domain tree;Diplonema sp;Prevotella denticola;Cyanothece sp;Ribosomal tree of life;Candida albicans;Anaerolinea thermophila;Methanocaldococcus jannaschii;Phaeodactylum tricornutum;Methylacidiphilum infernorum;Methanosarcina mazei;Dictyostelium discoideum;Chlorobium limicola;Thermotoga maritima;Methanosphaera stadtmanae;Babesia bovis;Thermodesulfatator indicus;Thermovibrio ammonificans;Flamella sp;Korarchaeum cryptofilum;Syntrophus aciditrophicus;Methanobrevibacter smithii;Deinococcus deserti;Gemmatimonas aurantiaca;Dyadobacter fermentans;Methanococcus aeolicus;Tribonema sp;Toxoplasma gondii;Acetobacter pasteurianus;Methanococcoides burtonii;Leishmania major;Thalassiosira pseudonana;Aeropyrum pernix;Nitrosomonas europaea;mixture model;Thermococcus kodakarensis;Arabidopsis thaliana;Apis mellifera;Nitrosopumilis sp;Halobacterium salinarum;Acidilobus saccharovorans;Pyrobaculum aerophilium;Fibrobacter succinogenes;Acanthamoeba sp;Idiomarina loihiensis;Ciona intestinalis;Meiothermus silvanus;Thermocrinis albus;Neisseria meningitidis;Spirochaeta coccoides;Methanopyrus kandleri;Xylella fastidiosa;Bodo sp;Ignicoccus hospitalis;Physarum polycephalum;Desulfurococcus mucosus;Danio rerio;Compositional heterogeneity;Treponema brennaborense;Sulfolobus solfataricus;Hypterthermus butylicus;Picrophilus torridus;Plasmodium vivax;Denitrovibrio acetiphilus;Haloarcula marismortui;three-domain tree;Metallosphaera sedula;Phytophthora infestans;Planctomyces brasiliensis;Thermovirga lienii;Trypanosoma brucei;Dictyoglomus thermophilum;Cryptobacterium curtum;Trimastix pyriformis;Cryptococcus gattii;Dehalococcoides ethenogenes;Pyrolobus fumarii;Guillardia theta;Methanoculleus marisingri;Thermus scotoductus;Syntrophothermus lipocalidus;Coraliomargarita akajimensis;Desulfobacca acetoxidans;Nitrosospira multiformis;Heterosigma sp;Prochlorococcus marinus;Fusobacterium nucleatum;Rhodopirellula baltica;Emiliana huxleyi;Nanoarchaeum equitans;Pyrococcus horikoshii;Ostreococcus tauri;Euglena sp
DOI:
doi:10.5061/dryad.7785h
摘要:
. The ribosomal machinery, universal to all cellular life, represents a protein repertoire resistant to horizontal gene transfer, which provides a largely congruent

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