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Data from: Comprehensive phylogeny of ray-finned fishes (Actinopterygii) based on transcriptomic and genomic data
负责人:
关键词:
Transcriptomics;Actinopterygii;paralogy;Ray-finned Fish;phylogenomics
DOI:
doi:10.5061/dryad.5b85783
摘要:
ropriate for phylogenomic datasets using explicit gene genealogy interrogation settle some long-standing uncertainties, such as the branching order at the base
Data from: Reconstructing phylogeny from reduced-representation genome sequencing data without assembly or alignment
负责人:
关键词:
Quercus;alignment-free;assembly-free;RADseq;phylogenomics;missing data
DOI:
doi:10.5061/dryad.r0hq0
摘要:
o proved to be suitable for interspecific phylogeny reconstruction. RADseq data pose challenges for standard phylogenomic methods, however, due to incomplete
Data from: Phylotranscriptomics resolves interspecific relationships and indicates multiple historical out-of-North America dispersals throug
负责人:
关键词:
Picea abies;molecular phylogeny;Noegene;Biogeography;Picea;phylogenomics
DOI:
doi:10.5061/dryad.595c22m
摘要:
, we reconstructed a well-resolved phylogeny of Picea by comparative transcriptomic analysis based on a complete species sampling. The phylogenetic analysis, together
Data from: Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Legumi
负责人:
关键词:
hybrid capture;Next-generation sequencing;Radiation;population genomics;Mimosoideae;targeted enrichment;Inga;phylogenomics
DOI:
doi:10.5061/dryad.r9c12
摘要:
Evolutionary radiations are prominent and pervasive across many plant lineages in diverse geographical and ecological settings; in neotropical ra
Data from: Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis
负责人:
关键词:
metacercaria;Diplostomoidea;Platyhelminthes;Strigeida;Hysteromorpha;Diplostomida;Cotylurus;Holocene;Nuclear-mitochondrial discordance;Alaria;phylogenomics
DOI:
doi:10.5061/dryad.7kj7t1q
摘要:
topology, we also analyzed hundreds of ultra-conserved elements (UCEs) assembled from shotgun sequencing. The Diplostomida was paraphyletic in the mt ge
Data from: Phylogenomics resolves evolutionary relationships among ants, bees, and wasps
负责人:
关键词:
phylogenomics transcriptomics eusociality evolution of aculeates
DOI:
doi:10.5061/dryad.jt440
摘要:
ng the major lineages of aculeate Hymenoptera remain contentious. We address this problem here by generating and analyzing genomic data for a representative
Data from: Phylogenomic insights into the diversification of salamanders in the Isthmura bellii group across the Mexican highlands
负责人:
关键词:
Neogene;Isthmura;Biogeography;Pseudoeurycea;Miocene;Pliocene;Plestiocene;phylogenomics;phylogeography
DOI:
doi:10.5061/dryad.875j1k8
摘要:
oup of salamanders, a widespread amphibian across the Mexican highlands, using sequence capture of ultraconserved elements. Results suggest that the I. bellii gr
Data from: Sequence capture phylogenomics of historical ethanol-preserved museum specimens: unlocking the rest of the vault
负责人:
关键词:
museum collections;degraded DNA;Opiliones;ultraconserved elements;ethanol preservation;phylogenomics
DOI:
doi:10.5061/dryad.sh5b962
摘要:
-based studies. Sequence capture methods have proven incredibly useful for phylogenomics, providing the additional ability to sequence historic
Data from: Genome-wide SNPs resolve phylogenetic relationships in the North American spruce budworm (Choristoneura?fumiferana) species complex
负责人:
关键词:
genotyping-by-sequencing;population genetics;species relationships;RAD-seq;systematics;phylogenomics
DOI:
doi:10.5061/dryad.00715
摘要:
approaches have been developed to take advantage of these advances. Genotyping-by-sequencing is becoming a regular tool for gathering phylogenetic

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