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Data from: Conflicting evolutionary histories of the mitochondrial and nuclear genomes in New World Myotis bats
负责人:
关键词:
incomplete lineage sorting;Concatenation;summary tree methods;UCE;ultraconserved elements;Reticulation;Vespertilionidae;phylogenomics
DOI:
doi:10.5061/dryad.5g205
摘要:
ge sorting, introgressive hybridization, or even phylogenetic error. Despite the degree of discordance between nuclear UCE loci and the mitochondrial genome and among UCE loci themselve
Data from: Potentially adaptive mitochondrial haplotypes as a tool to identify divergent nuclear loci
负责人:
关键词:
DOI:
doi:10.5061/dryad.0s3t5
摘要:
nuclear loci that would display increased levels of genetic divergence compared to neutral nuclear loci in chum salmon (Oncorhynchus keta). Populations
Data from: Species tree estimation of North American chorus frogs (Hylidae: Pseudacris) with parallel tagged amplicon sequencing
负责人:
关键词:
reduced representation library;Pseudacris;anonymous nuclear locus;phylogenetics;targeted amplicon sequencing;high-throughput sequencing
DOI:
doi:10.5061/dryad.23rc0
摘要:
ng anonymous nuclear loci that were recently developed using a reduced representation library approach. We sequenced 27 nuclear loci and three mitochondrial loci
Data from: Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae
负责人:
关键词:
hybrid capture;Next-generation sequencing;Radiation;population genomics;Mimosoideae;targeted enrichment;Inga;phylogenomics
DOI:
doi:10.5061/dryad.r9c12
摘要:
to increase phylogenetic resolution within Inga. Transcriptome data from three Inga species were used to select 264 nuclear loci for targeted enrichment
Data from: Evaluation of candidate DNA barcoding loci for economically important timber species of the mahogany family (Meliaceae)
负责人:
关键词:
Swietenia;DNA Barcoding;mahogany;Sapindales;Cedrela;Cenozoic;Meliaceae
DOI:
doi:10.5061/dryad.8172
摘要:
individual plastid loci was common. The combination of multiple loci did not improve performance. DNA barcoding with ITS alone revealed cryptic speci
Data from: Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam poplar
负责人:
关键词:
Natural Selection and Contemporary Evolution Molecular Evolution Speciation Genomics/Proteomics
DOI:
doi:10.5061/dryad.nj5h5
摘要:
As molecular phylogenetic analyses incorporate ever-greater numbers of loci, cases of cytonuclear discordance – the phenomenon in which nuclear
Data from: Evidence for allopolyploid speciation in Nymphoides (Menyanthaceae)
负责人:
关键词:
polyploidy;Nymphoides;Nymphoides cordata;Nymphoides grayana;phytoene desaturase;Nymphoides fallax;allopolyploidy;Nymphoides humboldtiana;hybridization;floating heart;speciation;Nymphoides aquatica
DOI:
doi:10.5061/dryad.5vh5403
摘要:
. In order to examine whether phylogenetic incongruence resulted from ancestral polyploidization events, we obtained DNA sequence data from two nuclear loci
Data from: Identifying genetic markers for a range of phylogenetic utility–from species to family level
负责人:
关键词:
locus selection;Eucalyptus;marker discovery;Next-generation sequencing;exon capture;phylogeny;Melaleuca;Mytraceae
DOI:
doi:10.5061/dryad.p20km22
摘要:
that allows identification of many low copy candidate loci from across the nuclear and chloroplast genomes, design probes for target capture
Data from: Congruent signals of population history but radically different patterns of genetic diversity between mitochondrial and nuclear mar
负责人:
关键词:
Reptiles;Habitat Degradation;Life History Evolution;phylogeography;from LGM to present;demography inferences;Iberolacerta bonnali
DOI:
doi:10.5061/dryad.mh6kq
摘要:
Historical factors, current population size, population connectivity and selective processes at linked loci contribute to shaping contemporar
Data from: Targeted re-sequencing of coding DNA sequences for SNP discovery in non-model species
负责人:
关键词:
conservation genetics;genetic monitoring;CDS;Eurasian lynx;Lynx lynx;single-nucleotide polymorphism;hybridization capture
DOI:
doi:10.5061/dryad.3f4jr01
摘要:
of a related model organism (the domestic cat Felis catus). Using this approach, we were able to survey intraspecific variation at hundreds of nuclear loci

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