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ng imputed high-density SNP genotypes
负责人:
Arranz, Juan José
关键词:
SNPs HD-Chip Imputation Linkage disequilibrium Churra sheep Inbreeding
DOI:
doi:10.5061/dryad.pr7gh
摘要:
animals, including 16 rams and their half-sib daughters, previously genotyped for the 50K-chip, was imputed to the HD-chip density based
Data from: Comparative analyses of QTLs influencing obesity and metabolic phenotypes in pigs and humans
负责人:
关键词:
SNP genotype data Illumina 60K porcine SNPchip
DOI:
doi:10.5061/dryad.3jj7f
摘要:
ween previously identified QTLs in both humans and pigs. The combined analysis of a large number of obesity phenotypes has provided insight in the ge
Data from: Comparison of SNPs and microsatellites for fine-scale application of genetic stock identification of Chinook salmon in the Columbia River Basin
负责人:
关键词:
conservation genetics;Oncorhynchus tshawytscha;Fisheries Management;contemporary;Ecological Genetics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.7986
摘要:
netic marker for GSI, however increasing availability and numerous advantages of single nucleotide polymorphism (SNP) markers make them an appealing alternative
Data from: Genetic subdivision and candidate genes under selection in North American gray wolves
负责人:
关键词:
Genomics\/Proteomics;Mammals;Holocene;Canis lupus;Ecological Genetics;Adaptation;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.c9b25
摘要:
e patterns of local adaptation revealed by SNP genotyping likely reflect high fidelity to natal habitats of dispersing wolves, strong ecological divergence amo
Data from: Insights into the maize pan-genome and pan-transcriptome
负责人:
关键词:
Vegetative Transition;Zea mays L.;RNAseq;flowering time;Pan Genome;Pan Transcriptome
DOI:
doi:10.5061/dryad.r73c5
摘要:
. Interestingly, with linkage disequilibrium mapping, 76.7% of the RTAs with at least one single nucleotide polymorphism (SNP) could be mapped to a single ge
Data from: Spatial dynamics and mixing of bluefin tuna in the Atlantic Ocean and Mediterranean Sea revealed using next generation sequencing
负责人:
Puncher, Gregory Neils
关键词:
Fish Fisheries Management Genomics/Proteomics Population Dynamics Population Genetics - Empirical
DOI:
doi:10.5061/dryad.2f7v9
摘要:
to resolve the species’ stock dynamics, a genome-wide search for spatially informative single nucleotide polymorphisms (SNPs) was undertaken
Data from: Finding stories in noise: mitochondrial portraits from RAD data
负责人:
关键词:
genotyping-by-sequencing;Labeobarbus natalensis;Genomics\/Proteomics;polyploidy;mitochondrial genome;hybridization;Labeobarbus aeneus;Labeobarbus kimberleyensis;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.75fh336
摘要:
of mitochondrial sequences. Most researchers using this approach appear to be unaware that many Single Nucleotide Polymorphisms (SNPs) identified from genome-wide
Data from: Insights into the genetic history of French cattle from dense SNP data on 47 worldwide breeds
负责人:
关键词:
SNP;Cattle;Bos indicus;Bos taurus
DOI:
doi:10.5061/dryad.2f185
摘要:
populations from different parts of the world (with a special focus on French cattle) genotyped for 44,706 autosomal SNPs. The analyzed data set consisted of ne
Data from: Genome-wide diversity and demographic dynamics of Cameroon goats and their divergence from east African, north African, and Asi
负责人:
Tarekegn, Getinet M.
关键词:
Genetic admixture Goat Haplogroup Haplotypes Population expansion
DOI:
doi:10.5061/dryad.mc40jt6
摘要:
) and autosomal markers (four populations) generated with the Caprine 50K SNP chip. To infer genetic relationships at continental and global level, genotype
Data from: Intra-individual polymorphism in chloroplasts from NGS data: where does it come from and how to handle it?
负责人:
关键词:
GATK;SNP;NGS;heterozygote;Chloroplast;SAMtools
DOI:
doi:10.5061/dryad.31733
摘要:
bioinformatics pipelines’ error rates for SNP and genotypes calling using SNPs identified in Sanger sequencing. Specific pipelines are adequate to deal with

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