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Data from: Constraints on adaptation of Escherichia coli to mixed-resource environments increase over time
负责人:
关键词:
trade-offs;pleiotropy;Escherichia coli;population genetics;Adaptation
DOI:
doi:10.5061/dryad.4647d
摘要:
's ability to adapt to the individual resources by comparing the fitness of replicate Escherichia coli populations evolved for 6000 gener
Data from: A comparison of methods to measure fitness in Escherichia coli
负责人:
关键词:
method;Fitness;Escherichia coli;Experimental evolution;Holocene
DOI:
doi:10.5061/dryad.4875k
摘要:
measurements are especially important in experimental studies of evolution using microbes. The Long-Term Evolution Experiment (LTEE) with Escherichia coli provides
Data from: Epistasis and allele specificity in the emergence of a stable polymorphism in Escherichia coli
负责人:
关键词:
Experimental evolution;epistasis;Escherichia coli;adaptive diversification;central metabolism;polymorphism;whole-genome re-sequencing;allele specificity
DOI:
doi:10.5061/dryad.12c6b
摘要:
these opportunities are poorly understood except in cases of single mutations. We examined how two Escherichia coli lineages diverged from thei
Data from: Test of synergistic interactions among deleterious mutations in bacteria
负责人:
关键词:
epistasis;Fitness;Escherichia coli
DOI:
doi:10.5061/dryad.rg8mb
摘要:
of Escherichia coli carrying one, two or three successive mutations and measured their fitness relative to an unmutated competitor. The relationship between mutation
Data from: Negative epistasis between beneficial mutations in an evolving bacterial population
负责人:
关键词:
Beneficial mutations;Escherichia coli;epistasis;Experimental evolution;Adaptation
DOI:
doi:10.5061/dryad.5rv40
摘要:
to fix in an experimental population of Escherichia coli. Epistasis depended on the effects of the combined mutations—the larger the expected benefit, the more negative
Data from: Adding biotic complexity alters the metabolic benefits of mutualism
负责人:
关键词:
exploitation;Salmonella enterica;S. enterica;cooperation;Escherichia coli;metabolic modeling;mutualism;E. coli;Methylobacterium extorquens
DOI:
doi:10.5061/dryad.5jk4d
摘要:
a when it exchanges methionine for carbon in an obligate mutualism with an auxotrophic Escherichia coli. A third bacterium, Methylobacterium extorquens, was then ad
Data from: Ecological and genetic determinants of plasmid distribution in Escherichia coli
负责人:
关键词:
plasmid profile;population structure;antibiotic resistance;Escherichia coli;mobile elements;Bos taurus;replicon typing
DOI:
doi:10.5061/dryad.5f1f8
摘要:
distribution in bacterial populations. Here the factors affecting the diversity and distribution of the large plasmids of Escherichia coli were explored
Data from: Effects of genotype on rates of substitution during experimental evolution
负责人:
关键词:
Escherichia coli;molecular evolution;epistasis;Selection - Experimental;variation
DOI:
doi:10.5061/dryad.36td2
摘要:
, mutation rates, or in the distribution of fitness effects (DFE) of available beneficial mutations. By whole genome sequencing of Escherichia coli populations
Data from: Ecological and evolutionary dynamics of coexisting lineages during a long-term experiment with E. coli
负责人:
关键词:
long term coexistence;Escherichia coli;catabolic profile;ecological interaction;Adaptation;global transcription;diversification;negative frequency dependence
DOI:
doi:10.5061/dryad.d7k5r5d2
摘要:
y entail repeated bouts of evolution. Here we examine two Escherichia coli lineages, called L and S, that coexisted for more than 30,000 generations after
Data from: Distinguishing causes of virulence evolution: reply to Alizon & Michalakis
负责人:
关键词:
symbiosis;Escherichia coli;Parasitism
DOI:
doi:10.5061/dryad.293mk
摘要:
In a recent study of the symbiosis between bacteria and plasmids, the available evidence suggests that experimental evolution of plasmid virulence

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