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Data from: Phylogenetic inference and divergence dating of snakes using molecules, morphology and fossils: new insights into conver
负责人:
关键词:
Total Evidence;limb loss;Bayesian phylogenetics;relaxed clock;Macrostomata;Serpentes;ancestral state reconstruction;Ophidia
DOI:
doi:10.5061/dryad.cm603
摘要:
Bayesian divergence time analyses were used to simultaneously infer the phylogenetic relationships and date the major clades of snakes including sever
Data from: A Bayesian approach for inferring the impact of a discrete character on rates of continuous-character evolution in the presence
负责人:
关键词:
continuous-character evolution;data augmentation;Bayesian phylogenetic comparative methods;discrete-character evolution
DOI:
doi:10.5061/dryad.499c4j2
摘要:
of the discrete character is inflated because the null model is extremely unrealistic. Here, we describe MuSSCRat, a Bayesian approach for inferring the impact
Data from: The consequences of not accounting for background selection in demographic inference
负责人:
关键词:
Natural Selection and Contemporary Evolution;Evolutionary Theory;Population Genetics - Theoretical;population dynamics
DOI:
doi:10.5061/dryad.37hc1
摘要:
ve simulations with BGS to determine biases and behaviour of demographic inference using an approximate Bayesian approach. We find that results can be posi
Data from: Bayesian inference of a historical bottleneck in a heavily exploited marine mammal
负责人:
关键词:
conservation genetics;contemporary;Arctocephalus gazella;Mammals;Conservation Biology;Wildlife Management;population dynamics;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.0kj5n
摘要:
Emerging Bayesian analytical approaches offer increasingly sophisticated means of reconstructing historical population dynamics from
Data from: Inferring the mode of origin of polyploid species from next-generation sequence data
负责人:
关键词:
approximate Bayesian computation;Capsella;Polyploidization;Disomic inheritance;speciation
DOI:
doi:10.5061/dryad.g611t
摘要:
of polyploids. Using simulations, we evaluate the robustness of evolutionary inference by ABC for tetraploid species as a function of the number of individuals
Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
负责人:
关键词:
Robinson-Foulds;false negative;statistical consistency;maximum likelihood;Bayesian;phylogenetics;false positive
DOI:
doi:10.5061/dryad.65tn4
摘要:
ng maximum likelihood (ML) and Bayesian approaches. Among the methods examined, we found that topology-based methods often performed better using ML gene trees and methods
Data from: A Bayesian method for the joint estimation of outcrossing rate and inbreeding depression
负责人:
关键词:
inbreeding coefficient;mating system;outcrossing rate;Bayesian;MLTR;inbreeding depression;Mimulus guttatus
DOI:
doi:10.5061/dryad.7455b
摘要:
when sampling natural populations). Here, we present a Bayesian method implemented in the program BORICE that effectively estimates t and F when family sizes ar
Data from: Exact Bayesian inference for animal movement in continuous time
负责人:
关键词:
Bayesian statistics GPS data Markov chain Monte Carlo movement modelling
DOI:
doi:10.5061/dryad.mv02k
摘要:
inference. The methodology applies to data that are regular or irregular in time, with or without missing values. We apply these methods to GPS data from
Data from: Concordance analysis in mitogenomic phylogenetics
负责人:
关键词:
Hynobiidae;Plethodontidae;Concatenation;mitogenomics;phylogenetics;Bayesian concordance analysis
DOI:
doi:10.5061/dryad.8d3r7
摘要:
clade. As a demonstration of the application of Bayesian concordance analysis to empirical data, I analyzed two different salamander (Hynobiidae
Data from: Swapping birth and death: symmetries and transformations in phylodynamic models
负责人:
关键词:
Basel;maximum likelihood;phylogenetics;Bayesian inference;Phylodynamics;birth-death models;algebraic symmetries;speciation-extinction models
DOI:
doi:10.5061/dryad.57704ft
摘要:
ticularly to maximum likelihood and Bayesian inference methods, as well as to model selection.

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