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Fully Bayesian Analysis of RNA-seq Counts for the Detection of Gene Expression Heterosis
负责人:
关键词:
Genetics Molecular Biology Biotechnology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
DOI:
doi:10.6084/m9.figshare.6949499
摘要:
distributions for p-values under these null hypotheses. Thus, we develop a general hierarchical model for count data and a fully Bayesian analysis in which an efficient
Fully Bayesian analysis of RNA-seq counts for the detection of gene expression heterosis
负责人:
关键词:
Genetics Molecular Biology Biotechnology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
DOI:
doi:10.6084/m9.figshare.6949499.v1
摘要:
and non-uniform distributions for p-values under these null hypotheses. Thus, we develop a general hierarchical model for count data and a fully Bayesian analysis in which
Data from: Deflating trees: improving Bayesian branch-length estimates using informed priors
负责人:
关键词:
prior choice;Bayesian phylogenetics;branch lengths
DOI:
doi:10.5061/dryad.1gm13
摘要:
Prior distributions can have a strong effect on the results of Bayesian analyses. However, no general consensus exists for how priors should be se
Data from: Factors affecting GEBV accuracy with single-step Bayesian models
负责人:
Zhou, Lei
关键词:
DOI:
doi:10.5061/dryad.hk14j
摘要:
in term of single-step analysis. Here, we explored the components of GEBV accuracy in single-step Bayesian analysis with a simulation study. Three scenarios
Data from: Estimating age and age class of harvested hog deer from eye lens mass using frequentist and Bayesian methods
负责人:
关键词:
Bayesian age estimation age class mammals linear discriminant analysis eye lens non-linear inverse prediction inverse prediction deer known-age individuals
DOI:
doi:10.5061/dryad.0r31r
摘要:
by the curvilinear relationship between eye lens mass and age. We used frequentist and Bayesian methods to predict the ages and age classes of harvested hog deer Axis
Data from: Upstream analyses create problems with DNA-based species delimitation
负责人:
关键词:
species delimitation;bpp program;Bayesian;coalescent
DOI:
doi:10.5061/dryad.3hc8s
摘要:
for analyses with bpp), which can lead to under or overestimation of biodiversity, even though the Bayesian program bpp itself may perform very well. These res
Data from: The effect of close relatives on unsupervised Bayesian clustering algorithms in population genetic structure analysis
负责人:
关键词:
close relatives;STRUCTURE software;family structure;subpopulation;molecular markers
DOI:
doi:10.5061/dryad.668tn571
摘要:
to investigate the impact of close relatives in a sample on Bayesian population structure analysis. We also showed that, when close relatives were identified
Data from: Cryptic genetic diversity is paramount in small-bodied amphibians of the genus Euparkerella (Anura: Craugastoridae) endemic
负责人:
关键词:
Multilocus Species Tree;Euparkerella cochranae;Terrarana;Neotropical;Euparkerella tridactyla;Euparkerella brasiliensis;Amphibia;phylogeny;Miocene;Pliocene;Euparkerella robusta;Pleistocene
DOI:
doi:10.5061/dryad.690jk
摘要:
cent methods of species tree inference. We also used Bayesian clustering analysis and a recent Bayesian coalescent-based approach specifically to infer
Data from: Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data
负责人:
关键词:
phylogenetic analysis;morphology;Mk Model;parsimony;Bayesian;maximum likelihood
DOI:
doi:10.5061/dryad.8dd39
摘要:
timating the tree used to simulate the data. After assessing clade support, Bayesian and Maximum Likelihood exhibit comparable levels of accuracy, and parsi
d on parsimony and Bayesian inference
负责人:
关键词:
Eusphenodontia;Triassic;Sphenodontia;Rhynchocephalia;taxonomy;phylogenetics;Norian-Rhaetian;Neosphenodontia;Fraserosphenodon latidens;Paleontology;Lepidosauria
DOI:
doi:10.5061/dryad.9n153
摘要:
using both parsimony and Bayesian approaches. Our taxonomic review and both phylogenetic analyses reveal that C. latidens is not referable

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