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Data from: Stem cell differentiation trajectories in Hydra resolved at single-cell resolution
负责人:
Siebert, Stefan
关键词:
Hydra URD Drop-seq single-cell Seq stem cell differentiation trajectory
DOI:
doi:10.5061/dryad.v5r6077
摘要:
this homeostatic tissue maintenance are not well understood. We sequenced 24,985 Hydra single-cell transcriptomes and identified the molecular si
Data from: Suitability of different mapping algorithms for genome-wide polymorphism scans with Pool-Seq data.
负责人:
关键词:
GWAS;Next Generation Sequencing;Complex traits;mapping algorithm;Pool-Seq
DOI:
doi:10.5061/dryad.2g3s4
摘要:
and clc4 are most suitable for mapping Pool-Seq data. Nevertheless, no single algorithm is sufficient for avoiding all false positives. We show tha
Data from: Single-cell virus sequencing of influenza infections that trigger innate immunity
负责人:
关键词:
10X Chromium;defective virus;influenza virus;single-cell RNA-seq;Interferon;NS1;PacBio;PB1;Heterogeneity
DOI:
doi:10.5061/dryad.nh053c6
摘要:
sequences of all viral genes in single cells infected with a nominally "pure" stock of influenza virus. Most cells are infected by virions with defects, som
Data from: Advanced characterization of DNA molecules in rAAV vector preparations by single-stranded virus next-generation sequencing
负责人:
关键词:
Contaminants;Illumina;Adeno-associated virus;quality control;quantitative PCR;AAV;DNA;bioinformatics;gene therapy;vector;NGS;virus
DOI:
doi:10.5061/dryad.fs4cp
摘要:
preparations, we developed a method based on next-generation sequencing (NGS) to extensively characterize single-stranded DNA virus preparations (SSV-Seq
Nucella lapillus
负责人:
关键词:
Molluscs;phylogeography;Nucella lapillus;Holocene;Ecological Genetics;Adaptation;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.610dd
摘要:
assembly, we identified thousands of fixed single-nucleotide polymorphisms (SNPs) between these latitudinal clades that map to protein-coding genes
Data from: DNA methylation and gene expression changes derived from assisted reproductive technologies can be decreased by reproductive fluids
负责人:
关键词:
DOI:
doi:10.5061/dryad.n77r3
摘要:
ts from single pig blastocysts showing differences between in vivo and in vitro produced embryos. Blastocysts were produced in vitro either without (C-IVF
Data from: Single cell RNA-seq analysis reveals that prenatal arsenic exposure results in long-term, adverse effects on immune gene expressi
负责人:
关键词:
Arsenic;drinking water
DOI:
doi:10.5061/dryad.vt4b8gtp6
摘要:
ater lung damage and inflammation in arsenic exposed mice versus control mice. Single-cell RNA sequencing analysis of immune cells harvested from IAV infected lungs
Data from: Effects of multiple climate change stressors on gene expression in blue rockfish (Sebastes mystinus)
负责人:
关键词:
ocean acidification;RNA-seq;upwelling;enzyme activity;multiple stressors;Sebastes mystinus
DOI:
doi:10.5061/dryad.qs23971
摘要:
, blue rockfish induced a unique set of ionoregulatory and hypoxia responsive genes not expressed under the single stressors. Thus, high pCO2 and hypoxia
Data from: Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis
负责人:
关键词:
androdioecy;linkage;dioecy;sexually antagonistic selection;sex chromosome;hermaphroditism;Tripos cancriformis
DOI:
doi:10.5061/dryad.4635t
摘要:
and scored >3000 high coverage novel genomic RAD markers. Presence–absence of markers, single-nucleotide polymorphism association and read depth identified 52
Data from: Metatranscriptomics yields new genomic resources and sensitive detection of infections for diverse blood parasites
负责人:
关键词:
Plasmodium;malaria parasite;Co-infection;RNA-seq;Parahaemoproteus;Holocene;Leucocytozoon
DOI:
doi:10.5061/dryad.2646vp0
摘要:
ng with infection intensity. In total, we provide data for 1,502 single-copy orthologous loci from a phylogenetically-diverse set of 33 haemosporidian mitochondrial lineages

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