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Data from: Ultraconserved element (UCE) probe set design: base genome and initial design parameters critical for optimization
负责人:
关键词:
ultraconserved elements;genomics;phylogenetics;probe design;phylogenomics;bait design
DOI:
doi:10.5061/dryad.2f62927
摘要:
and initial bait design stringency parameters greatly alter the number of resultant probes included in final probe sets and strongly affect the number of loci
Data from: A revised design for microarray experiments to account for experimental noise and uncertainty of probe response
负责人:
关键词:
microarray calibration;Mus musculus;probe response;copy number variation;Freundlich isotherm;noise;Langmuir isotherm
DOI:
doi:10.5061/dryad.57ms3
摘要:
is the variance in probe binding, which can be assessed by replicating array probes. The second source is poor probe performance, which can be asses
Data from: A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering
负责人:
关键词:
Nuclear Genes;k-means clustering;Target Enrichment;HybSeq;Machine Learning;Angiosperms;phylogenomics
DOI:
doi:10.5061/dryad.s3h9r6j
摘要:
of orthologous loci for probe design. In plants, identifying orthologous loci has proven difficult due to a large number of whole-genome duplication events, es
Data from: A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes
负责人:
关键词:
Crop ecology Predator-prey interactions Gut content analysis Next Generation Sequencing
DOI:
doi:10.5061/dryad.qv633
摘要:
s suppressed using a blocking probe. However, blocking probes can potentially block other species, particularly if they are phylogenetically close. Her
Data from: Advancing mite phylogenomics: designing ultraconserved elements for Acari phylogeny
负责人:
关键词:
DOI:
doi:10.5061/dryad.2168568
摘要:
evolution,we design targeted ultraconserved genomic elements (UCEs) probes, intended for resolving the complex relationships between mite lineages and closely
Data from: Colorimetric and fluorescent probes for real-time naked eye sensing of copper ion in solution and on paper substrate
负责人:
关键词:
copper ion;fluorescent probe;colorimetric probe;solid-state sensor
DOI:
doi:10.5061/dryad.51726
摘要:
plot and mass spectra measurement revealed a 1 : 1 coordination mode between Cu2+ and probe BT in ethanol/HEPES buffer (pH 7.2, v/v, 1/4) solution
Data from: Novel acridine-based thiosemicarbazones as “turn-on” chemosensors for selective recognition of fluoride anion: a spectro
负责人:
关键词:
DOI:
doi:10.5061/dryad.9nq2kc4
摘要:
?, ClO4?, CN?, and SCN?. Further, upon the gradual addition of fluoride anion (F?) source (TBAF), a well-defined change in color of solution of probes 3a
Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics
负责人:
关键词:
DNA probes long range PCR MiSeq next generation sequencing plastomes whole chloroplast sequencing
DOI:
doi:10.5061/dryad.t6b05
摘要:
applicable at deep multiplexed levels. The protocol uses cheap in-house species-specific probes developed via long range PCR of the entire chloro
Data from: Efficient in situ barcode sequencing using padlock probe-based BaristaSeq
负责人:
关键词:
in situ sequencing
DOI:
doi:10.5061/dryad.5dd92
摘要:
, padlock probe-based technique for in situ barcode sequencing compatible with Illumina sequencing chemistry. BaristaSeq results in a five-fold increase
Data from: Super-resolution imaging of a 2.5 kb non-repetitive DNA in situ in the nuclear genome using molecular beacon probes
负责人:
关键词:
fluorescence in situ hybridization;stochastic optical reconstruction?microscopy;super-resolution imaging;molecular beacons;non-repetitive DNA
DOI:
doi:10.5061/dryad.126k9
摘要:
and chromatin organization in single cells. Recent advances in fluorescence in situ hybridization (FISH) using Oligopaints probes enabled super-resolution imaging of genomic

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