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Data from: Ultraconserved element (UCE) probe set design: base genome and initial design parameters critical for optimization
- 负责人:
- DOI:
- doi:10.5061/dryad.2f62927
- 摘要:
- and initial bait design stringency parameters greatly alter the number of resultant probes included in final probe sets and strongly affect the number of loci
Data from: A revised design for microarray experiments to account for experimental noise and uncertainty of probe response
- 负责人:
- DOI:
- doi:10.5061/dryad.57ms3
- 摘要:
- is the variance in probe binding, which can be assessed by replicating array probes. The second source is poor probe performance, which can be asses
Data from: A universal probe set for targeted sequencing of 353 nuclear genes from any flowering plant designed using k-medoids clustering
- 负责人:
- 关键词:
- Nuclear Genes;k-means clustering;Target Enrichment;HybSeq;Machine Learning;Angiosperms;phylogenomics
- DOI:
- doi:10.5061/dryad.s3h9r6j
- 摘要:
- of orthologous loci for probe design. In plants, identifying orthologous loci has proven difficult due to a large number of whole-genome duplication events, es
Data from: A pragmatic approach to the analysis of diets of generalist predators: the use of next-generation sequencing with no blocking probes
- 负责人:
- DOI:
- doi:10.5061/dryad.qv633
- 摘要:
- s suppressed using a blocking probe. However, blocking probes can potentially block other species, particularly if they are phylogenetically close. Her
Data from: Advancing mite phylogenomics: designing ultraconserved elements for Acari phylogeny
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.2168568
- 摘要:
- evolution,we design targeted ultraconserved genomic elements (UCEs) probes, intended for resolving the complex relationships between mite lineages and closely
Data from: Colorimetric and fluorescent probes for real-time naked eye sensing of copper ion in solution and on paper substrate
- 负责人:
- DOI:
- doi:10.5061/dryad.51726
- 摘要:
- plot and mass spectra measurement revealed a 1 : 1 coordination mode between Cu2+ and probe BT in ethanol/HEPES buffer (pH 7.2, v/v, 1/4) solution
Data from: Novel acridine-based thiosemicarbazones as “turn-on” chemosensors for selective recognition of fluoride anion: a spectro
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.9nq2kc4
- 摘要:
- ?, ClO4?, CN?, and SCN?. Further, upon the gradual addition of fluoride anion (F?) source (TBAF), a well-defined change in color of solution of probes 3a
Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetics
- 负责人:
- 关键词:
- DNA probes long range PCR MiSeq next generation sequencing plastomes whole chloroplast sequencing
- DOI:
- doi:10.5061/dryad.t6b05
- 摘要:
- applicable at deep multiplexed levels. The protocol uses cheap in-house species-specific probes developed via long range PCR of the entire chloro
Data from: Efficient in situ barcode sequencing using padlock probe-based BaristaSeq
- 负责人:
- 关键词:
- in situ sequencing
- DOI:
- doi:10.5061/dryad.5dd92
- 摘要:
- , padlock probe-based technique for in situ barcode sequencing compatible with Illumina sequencing chemistry. BaristaSeq results in a five-fold increase
Data from: Super-resolution imaging of a 2.5 kb non-repetitive DNA in situ in the nuclear genome using molecular beacon probes
- 负责人:
- DOI:
- doi:10.5061/dryad.126k9
- 摘要:
- and chromatin organization in single cells. Recent advances in fluorescence in situ hybridization (FISH) using Oligopaints probes enabled super-resolution imaging of genomic