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Data from: Hierarchical Hybrid Enrichment: multi-tiered genomic data collection across evolutionary scales, with application to chorus frogs
负责人:
关键词:
data filtering;Anchored Hybrid Enrichment;heat map;phylogenetic robustness;reproductive character displacement;population genomics;contact zone;reinforcement;hybridization;phylogeography
DOI:
doi:10.5061/dryad.0sf2hm8
摘要:
allenge for evolutionary biologists. Of the available methods for sub-sampling the genome, hybrid enrichment (sequence capture) has become one of the primary mea
Data from: Multilocus phylogeny of Gryllus field crickets (Orthoptera: Gryllidae: Gryllinae) utilizing anchored hybrid enrichment
负责人:
关键词:
Gryllus;molecular phylogeny;anchored hybrid enrichment (AHE);insects
DOI:
doi:10.5061/dryad.mkkwh70vf
摘要:
ket G. bimaculatus De Geer. Acheta, Teleogryllus, and Nigrogryllus were used as outgroups. Anchored hybrid enrichment was used to generate 492,531 base pairs
Data from: Resolving relationships among the megadiverse butterflies and moths with a novel pipeline for Anchored Phylogenomics
负责人:
关键词:
sequence capture;target capture;ultraconserved elements;hybrid enrichment;Lepidoptera;Transcriptomics;Bombycoidea;exon;phylogenomics
DOI:
doi:10.5061/dryad.rf7g5
摘要:
enrichment and transcriptomics are two techniques that leverage next-generation sequencing and have shown much promise. However, methods for processing hybrid
Data from: Diversification of Hawaiian Cyrtandra (Gesneriaceae) under the influence of incomplete lineage sorting and hybridization
负责人:
关键词:
gene flow;Gesneriaceae;Cyrtandra;Hyb-Seq;phylogenomics
DOI:
doi:10.5061/dryad.s7h937n
摘要:
ly young age and evidence of hybridization between species. We utilized targeted enrichment, high-throughput sequencing, and modern phylogenomics tools to test
Data from: Evaluating the performance of anchored hybrid enrichment at the tips of the tree of life: a phylogenetic analysis of Australian Eugongylus
负责人:
关键词:
DOI:
doi:10.5061/dryad.g4mj2
摘要:
d the anchor hybrid enriched loci to infer lineage divergence parameters using coalescent models of isolation with migration. Results Phylogenetic
Data from: Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae
负责人:
关键词:
hybrid capture;Next-generation sequencing;Radiation;population genomics;Mimosoideae;targeted enrichment;Inga;phylogenomics
DOI:
doi:10.5061/dryad.r9c12
摘要:
sequence data gives only poor phylogenetic resolution among species. Here we explore the use of larger-scale nuclear gene data obtained though targeted enrichment
Data from: Asexual genome evolution in the apomictic Ranunculus auricomus complex: examining the effects of hybridization and mutation accumulation
负责人:
关键词:
Apomixis;SNPs;hybridization;Ranunculus auricomus;Ranunculus;poliploid
DOI:
doi:10.5061/dryad.nk151
摘要:
(i.e. elevated) dN/dS ratios. Gene ontology analyses of these outliers revealed significant enrichment of genes associated with reproduction including meiosis
Data from: Determining epistatic selection in admixed populations
负责人:
关键词:
Dobzhansky-Muller Incompatibilities;population genomics;hybridization;hybridization;hybrid incompatibilities;hybrid incompatibilities;epistatic selection;linkage disequilibrium
DOI:
doi:10.5061/dryad.pk20h
摘要:
t the prevalence of positive LD in admixed populations does not in itself support the idea that two-locus incompatibilities are widespread, but the co-enrichment
Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for population genetic
负责人:
关键词:
DNA probes long range PCR MiSeq next generation sequencing plastomes whole chloroplast sequencing
DOI:
doi:10.5061/dryad.t6b05
摘要:
methods. In this study, we develop an easy and cost-effective protocol for in-solution enrichment hybridization capture of complete ch

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