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Data from: Tag jumps illuminated – reducing sequence-to-sample misidentifications in metabarcoding studies
负责人:
关键词:
Environmental DNA;Metabarcoding;Tag jumping;Diversity assessment;Second generation sequencing;Chimeras
DOI:
doi:10.5061/dryad.64687
摘要:
of sequences to samples and artificially inflate diversity. In this study, we document and investigate tag jumping in metabarcoding studi
Data from: Validation of COI metabarcoding primers for terrestrial arthropods
负责人:
关键词:
DNA metabarcoding;Primer bias;Degeneracy;insects;biodiversity
DOI:
doi:10.5061/dryad.249rk92
摘要:
Metabarcoding can rapidly determine the species composition of bulk samples and thus aids biodiversity and ecosystem assessment. Howeve
Data from: Reconstructing hyperdiverse food webs: gut content metabarcoding as a tool to disentangle trophic interactions on coral reefs
负责人:
关键词:
DOI:
doi:10.5061/dryad.t7pd371
摘要:
ecially for highly-diverse, tropical ecosystems. 2. We used gut content metabarcoding across a broad range of coral reef fishes (8 families, 22 species) in Mo’orea
Data from: Metabarcoding of shrimp stomach content: harnessing a natural sampler for fish biodiversity monitoring
负责人:
关键词:
Environmental DNA;Crustaceans;biodiversity assessment;trophic metabarcoding;Crangon crangon;Fish communities;Holocene
DOI:
doi:10.5061/dryad.7498b88
摘要:
intensive and highly selective. Recently, the application of metabarcoding techniques, on either sediment or aqueous environmental DNA, has rapidly gained
Data from: A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application
负责人:
关键词:
second generation sequencing DNA barcoding mini-barcode mitochondrial marker trophic interactions food web
DOI:
doi:10.5061/dryad.6gd51
摘要:
primer offers enormous promise for metazoan metabarcoding studies. We believe that this primer set will be a valuable asset for a range of applications
Data from: Spider webs, stable isotopes and molecular gut content analysis: multiple lines of evidence support trophic niche different
负责人:
Kennedy, Susan
关键词:
niche partitioning trophic niche adaptive radiation foraging behavior stable isotopes gut content metabarcoding
DOI:
doi:10.5061/dryad.29p63mb
摘要:
c) stable isotope signatures of carbon and nitrogen in the spiders’ tissues, and d) gut content of spiders based on metabarcoding data. 4. We find significant
Data from: Diet and trophic interactions of a circumglobally significant gelatinous marine zooplankter, Dolioletta gegenbauri (Uljanin, 1884)
负责人:
Frischer, Marc
关键词:
Doliolid Pelagic Tunicate Selective Feeding qPCR South Atlantic Bight Next Generation Sequencing
DOI:
doi:10.5061/dryad.99p2308
摘要:
an 18S rRNA amplicon metabarcoding approach to identify the diet of captive-fed and wild-caught D. gegenbauri on the mid-continenta
Data from: Metabarcoding dietary analysis of coral dwelling predatory fish demonstrates the minor contribution of coral mutualists to their highly
负责人:
关键词:
Camallanidae;Vanikoridae;Miraciidae;Coelosphaeridae;Temora discaudata;Eviota;Trematoda;Actaeinae;food web;Autolytinae;Menaethius monoceros;Copepoda;Echinoidea;Caranx melampygus;Chromis vanderbilti;Liocarpilodes integerrimus;Trapezia areolata;Polychaeta;Trapezia rufopunctata;Cirratulidae;Palaemonella tenuipes;Lienardia mighelsi;Thalassoma hardwicke;Gammaropsis;Maxillopoda;Lysiosquillidae;Harpacticus;Cerithium;Enterogona;Gobiidae;Terebellidae;Pomachromis fuscidorsalis;Tanaidacea;Trapezia bidentata;Petrolisthes;Chlorurus sordidus;Syllidae;Maera;Pandalidae;Ampharetidae;Palaemonidae;Thor;Poecilostomatoida;Gigartinales;Apogon nigrofasciatus;Huenia;Hapalocarcinus;Pagurixus;Lithoglyptidae;Palaemonella rotumana;Mysida;Scarus globiceps;COI;Galatheidae;Palmyria;Pilodius;Plumularia;Demospongiae;Agalmatidae;Clionaidae;Decapterus macarellus;Emiliania huxleyi;Phylladiorhynchus;Dolabrifera dolabrifera;Paranamixis fijiensis;Gelidiaceae;Ophiactis;Brachyura;Nemichthys;Anthuridea;Aphelenchoididae;Argonautidae;Clausocalanus arcuicornis;Nephtyidae;Dendropoma;Eviota disrupta;Amblycirrhitus bimacula;Amphilochus;Santiidae;Plectroglyphidodon dickii;Chromis margaritifer;Titanoderma prototypum;Enchelyurus ater;Manaethius monoceros;Xanthias lamarcki;coral reefs;Atergatopsis germaini;Caranx sexfasciatus;Calcinus morgani;Cerithiidae;Dascyllus flavicaudus;Bemlos waipio;Viriola incisa;mutualism;Metabarcoding;Gymnothorax buroensis;Chlorodiella laevissima;Corallinaceae;Sagittidae;Candacia ethiopica;Harpacticoida;Phylladiorhynchus integrirostris;Azadinium poporum;Gastropoda;Phenacolepadidae;Homalopoma maculosa;Ctenochaetus striatus;Amphipoda;Clausocalanus minor;Scarus psittacus;Alpheidae;Sipuncula;Caridea;Chromis viridis;Esola;Isopoda;Jonesius triunguiculatus;Calanoida;Ceramiales;Cirripectes variolosus;Petalifera;Didemnidae;Perciformes;Plectroglyphidodon johnstonianus;Ptychoderidae;Chlorodiella crispipleopa;Corycaeus;Siphonostomatoida;Pseudocheilinus hexataenia;Sebastapistes tinkhami;Cuapetes ensifrons;Pocillopora;Stegastes nigricans;Gomphosus varius;Pascula muricata;Acartia negligens;Chaetodon trichrous;Zebrasoma scopas;Dascyllus aruanus;Stomatolina rubra;Vitricithna marmorata;Oithonidae;Perinia tumida;Hydrozoa;Cyclodius ungulatus;Halopteris constricta;Hippolytidae;Pilodius pugil;Arete indicus;Polynesoecetes kekeae;trophic interactions;Raoulserenea ornata;Fennera chacei;Oncaeidae;Trapeziidae;Bunodeopsis medusoides;Lachnopodus subacutus;Cestoda;Halichoeres hortulanus;Stylocheilus striatus;Erythrotrichiaceae;Monetaria annulus;Sargassaceae;Trapezia serenei;Ophiocoma pica;Decapoda;Harpiliopsis beaupresii;Drupa ricinus;3 days;Notopygos;Polynoidae;Galathea mauritiana;Margaretta;Verrucidae;Monetaria caputdraconis;Alpheus dolerus;Haminoea natalensis;Paguridae;Cheilopogon pitcairnensis;Munnidae;Pilodius flavus;Turbellaria;Chlorodiella barbata;Clausocalanus furcatus;Dendropoma gregaria;Malacostraca
DOI:
doi:10.5061/dryad.v0p71
摘要:
. DNA based dietary analysis can supplement predator removal experiments and provide high resolution for prey identification. Here we use a metabarcoding
gut content analysis
负责人:
关键词:
DOI:
doi:10.5061/dryad.44mn451
摘要:
ifying interactions. Metabarcoding from predator gut content extractions with universal primers promises to provide simple and rapid insights into food web inte
Data from: Local and landscape-scale heterogeneity shape spotted wing drosophila (Drosophila suzukii) activity and natural enemy abundance
负责人:
Schmidt, Jason M.
关键词:
metabarcoding habitat management landscape configuration landscape heterogeniety molecular gut content analysis Predator-prey interactions
DOI:
doi:10.5061/dryad.52c2k52
摘要:
natural enemies. Our initial analysis of predator diets, using a metabarcoding approach, suggests spatial structure in specialization on prey with high di

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