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Data from: An evaluation of transcriptome-based exon capture for frog phylogenomics across multiple scales of divergence (Class: Amphibia, Order
负责人:
关键词:
Arthroleptidae;Hemisotidae;Amphibians;Anura;Hyperoliidae;Microhylidae;Transcriptome-based exon capture;Ranoidea;genomics;frogs;phylogenomics;Amphibians;Brevicipitidae;Transcriptome-based exon capture
DOI:
doi:10.5061/dryad.pr3pr
摘要:
organisms. Transcriptome-based exon capture utilizes transcript sequences to design capture probes, typically using a reference genome to identify intron–exon boundaries
Data from: Exon capture phylogenomics: efficacy across scales of divergence
负责人:
关键词:
Reptiles;Genomics\/Proteomics;skinks;Phylogenetic Theory and Methods;Bioinfomatics\/Phyloinfomatics;Eugongylus
DOI:
doi:10.5061/dryad.34274
摘要:
capture studies of phylogenetically diverse samples, while minimizing potential bias. Our approach assembles each exon in each sample separately, by fir
Data from: Next-generation museum genomics: phylogenetic relationships among palpimanoid spiders using sequence capture techniques (Araneae
负责人:
关键词:
Mecysmaucheniidae;Araneomorphae;Huttoniidae;Stenochilidae;Palpimanidae;Archaeidae;ultra conserved elements;exon;ethanol
DOI:
doi:10.5061/dryad.387c58v
摘要:
techniques difficult to impossible for many specimens. Recent advances in Next-Generation Sequencing, specifically target capture, makes use of short
Data from: Identifying genetic markers for a range of phylogenetic utility–from species to family level
负责人:
关键词:
locus selection;Eucalyptus;marker discovery;Next-generation sequencing;exon capture;phylogeny;Melaleuca;Mytraceae
DOI:
doi:10.5061/dryad.p20km22
摘要:
that allows identification of many low copy candidate loci from across the nuclear and chloroplast genomes, design probes for target capture
Data from: Candidate adaptive genes associated with lineage divergence: identifying SNPs via next-generation targeted resequencing in mule deer
负责人:
关键词:
black-tailed deer;exon capture;non-model taxa;population genomics;Odocoileus hemionus;hybridization
DOI:
doi:10.5061/dryad.pv18p
摘要:
ween black-tailed deer and mule deer. This study also highlights techniques (and an exon capture array) that will facilitate population genomic research in other cervids
Data from: Phylogenetics of moth-like butterflies (Papilionoidea: Hedylidae) based on a new 13-locus target capture probe set
负责人:
关键词:
Lepidoptera systematics;exon capture;Anchored Hybrid Enrichment;Lepidoptera;Hedylidae;phylogenomics;Papilionoidea
DOI:
doi:10.5061/dryad.t5sd8c8
摘要:
. A 13-gene anchored hybrid enrichment probe set (‘BUTTERFLY2.0’), that includes standard markers used in butterfly phylogenetics, captured sequences from
Data from: Phylogenomics at the tips: inferring lineages and their demographic history in a tropical lizard, Carlia amax
负责人:
关键词:
Reptiles;Carlia gracilis;SNP;exon capture;speciation;Population Genetics - Empirical;Carlia amax
DOI:
doi:10.5061/dryad.1tk3d
摘要:
and phylogenetic studies. Here, we apply an exon capture approach to generate >99% complete sequence and SNP data across >2000 loci from a tropical skink, Carlia amax
Data from: Restructuring higher taxonomy using broad-scale phylogenomics: the living Ophiuroidea
负责人:
关键词:
exon capture;Deep sea;Marine;Mezozoic;Temporal-banding;Ophiuroidea;Invertebrates;Cenozoic;Post-Paleozoic;phylogenomics
DOI:
doi:10.5061/dryad.rb334
摘要:
it as the basis for a major revision of the higher classification of this class of marine invertebrates. We used an exon-capture system to generate a 1484 exon (273
Data from: Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: new approaches to long-standing problems
负责人:
关键词:
systematics;Coral;ultraconserved elements;Anthozoa;phylogeny;Cnidarians;target-capture
DOI:
doi:10.5061/dryad.36n40
摘要:
informative markers that can be reliably sequenced across a diversity of taxa. We designed and tested 16,308 RNA baits to capture 720 Ultraconserved Element

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