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Data from: Chloroplast phylogenomics resolves key relationships in ferns
负责人:
关键词:
chloroplast phylogenomics;Woodwardia unigemmata;Ferns;Cyrtomium devexiscapulae;lycophytes;polypods;chloroplast genome
DOI:
doi:10.5061/dryad.v23n2
摘要:
Studies on chloroplast genomes of ferns and lycophytes are relatively few in comparison with those on seed plants. Although a basic phylogenetic
Data from: Phylogenetic Congruence and Discordance Among One Morphological and Three Molecular Data Sets from Pontederiaceae
负责人:
关键词:
chloroplast DNA;morphology;Pontederiaceae;ndhF;Incongruence;rbcL;congruence tests
DOI:
doi:10.5061/dryad.116
摘要:
the phylogenetic history of the Pickerelweed family Pontederiaceae. The chloroplast data are converging to a single tree, presumably the true chloroplast phylogeny
Data from: Chloroplast phylogenomic data from the green algal order Sphaeropleales (Chlorophyceae, Chlorophyta) reveal complex patterns
负责人:
关键词:
Sphaeropleales;Chlorophyta;Algae;codon bias;phylogenetic conflict;plastid;Chlorophyceae
DOI:
doi:10.5061/dryad.q8n0v
摘要:
and four fragmentary chloroplast genome sequences across the green algal order Sphaeropleales. Our phylogenetic analyses of a 56-gene data set show that analyzing these
Data from: Intra-individual polymorphism in chloroplasts from NGS data: where does it come from and how to handle it?
负责人:
关键词:
GATK;SNP;NGS;heterozygote;Chloroplast;SAMtools
DOI:
doi:10.5061/dryad.31733
摘要:
sequences for inferring phylogeography or phylogeny. Even though the chloroplast is a haploid organelle, NGS plastome data identified a non negligible number of intra
Data from: Dated tribe-wide whole chloroplast genome phylogeny indicates recurrent hybridizations within Triticeae
负责人:
关键词:
DOI:
doi:10.5061/dryad.25743
摘要:
ortant, relationships within the tribe are still not understood. We analysed the phylogeny of chloroplast lineages among nearly all monogenomic Triticeae
Data from: Complete chloroplast genome of the genus Cymbidium: lights into the species identification, phylogenetic
负责人:
关键词:
DOI:
doi:10.5061/dryad.14214
摘要:
m the complete chloroplast genome can provide effective tools for species identification and phylogenetic resolution. Results: The complete nucleotide sequence
Data from: Phylogenetic analysis of 47 chloroplast genomes clarifies the contribution of wild species to the domesticated apple maternal line
负责人:
关键词:
chloroplast genome phylogeny;Malus sylvestris;Malus Pyrus chloroplast;Malus domestica;Malus sieversii;apples
DOI:
doi:10.5061/dryad.33817
摘要:
in a monophylum comprising wild M. sieversii accessions and other Asian apple species. The data demonstrate that M. sylvestris has contributed chloroplast genome
Data from: Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Ast
负责人:
关键词:
reticulate evolution;Astereae;Asteraceae;ddRAD;hybridization;rapid diversification;Diplostephium;introgression;phylogenomics;genome skimming
DOI:
doi:10.5061/dryad.cn74h
摘要:
of rapid diversification. Hybridization and introgression confound chloroplast and mitochondrial phylogenies in relation to the species tree as a result
Data from: Chloroplast phylogenomic analysis resolves deep-level relationships within the green algal class Trebouxiophyceae
负责人:
关键词:
Chlorellales;Chlorophyta;Ulvophyceae;Prasinophyceae;Trebouxiophyceae;plastid genome;Chlorophyceae;Pedinophyceae?;phylogenomics
DOI:
doi:10.5061/dryad.q4432
摘要:
d a chloroplast phylogenomic approach. Results: We determined the sequences of 29 chlorophyte chloroplast genomes and assembled amino acid and nucleotide data sets

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