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Data from: Species delimitation in endangered groundwater salamanders: implications for aquifer management and biodiversity conservation
- 负责人：
- DOI：
- doi:10.5061/dryad.3k5c0sh
- 摘要：
- groundwater depletion at regional and global scales. The karstic Edwards–Trinity aquifer system of west-central Texas is one of the most species-rich groundwater system
Updated Spiny Mouse Transcriptome Assembly (Now Includes Embryo-Specific Transcripts)
- 负责人：
- DOI：
- doi:10.5281/zenodo.1188363
- 摘要：
- SummaryUpdated spiny mouse transcriptome. Embryo-specific contigs generated from BioProject PRJNA436818 were added to the Trinity_v2
Updated Spiny Mouse Transcriptome Assembly (Now Includes Embryo-Specific Transcripts)
- 负责人：
- DOI：
- doi:10.5281/zenodo.1188364
- 摘要：
- SummaryUpdated spiny mouse transcriptome. Embryo-specific contigs generated from BioProject PRJNA436818 were added to the Trinity_v2
Data from: The unexpected depths of genome-skimming data: a case study examining Goodeniaceae floral symmetry genes
- 负责人：
- DOI：
- doi:10.5061/dryad.0500c
- 摘要：
- e performed for CYC1, CYC2, and CYC3 genes. Results: Overall Trinity, SOAPdenovo-Trans, and SOAPdenovo implementing lower k-mer values uncovered the most data
Data from: Universal target-enrichment baits for anthozoan (Cnidaria) phylogenomics: new approaches to long-standing problems
- 负责人：
- DOI：
- doi:10.5061/dryad.36n40
- 摘要：
- . Following Illumina sequencing and Trinity assembly, we recovered 1,774 of 1,791 targeted loci. The mean number of loci recovered from each species was 638 ± 222, with more loci
Data from: Performance of gene expression analyses using de novo assembled transcripts in polyploid species
- 负责人：
- DOI：
- doi:10.5061/dryad.4p6n481
- 摘要：
- unexplored. Results: Differential gene expression (DGE) analyses using putative genes inferred by Trinity, Corset and Grouper performed slightly different
Data from: Characterization and analysis of a de novo transcriptome from the pygmy grasshopper Tetrix japonica
- 负责人：
- DOI：
- doi:10.5061/dryad.n2g31
- 摘要：
- 608 206 paired-end clean reads were assembled into 61 141 unigenes using the trinity software; the mean unigene size was 771 bp, and the N50 length
nidae: fish) naturally infected by a copepod" data-category="" data-cropid="" data-dimen="" data-id="538a0b0e-81f8-11ea-ae96-0242ac110002"> Data from: "De novo assembly transcriptome for the rostrum dace (Leuciscus burdigalensis, Cyprinidae: fish) naturally infected by a copepod
- 负责人：
- 关键词：
- Ecological Genetics Fish Host Parasite Interactions Invasive Species Parasitology Transcriptomics
- DOI：
- doi:10.5061/dryad.6365v
- 摘要：
- in the immune response of fish. We used the Trinity methodology to reconstruct a de novo full-length transcriptome for L. burdigalensis. The resulting transcriptome
Data from: De novo transcriptome assembly databases in the butterfly orchid Phalaenopsis equestris
- 负责人：
- DOI：
- doi:10.5061/dryad.8253q
- 摘要：
- Phalaenopsis equestris, we combined Illumina HiSeq2000 for RNA-Seq and Trinity for de novo assembly to characterize the transcriptomes for 11 diverse
Data from: De novo transcriptome assemblies of four accessions of the metal hyperaccumulator plant Noccaea caerulescens
- 负责人：
- DOI：
- doi:10.5061/dryad.380n3
- 摘要：
- e assembled using the Trinity de novo assembler and were annotated and the protein sequences predicted. The comparison against the BUSCO plant early release
