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Data from: Probabilistic graphical model representation in phylogenetics
负责人:
关键词:
tree plate;Inference;Statistical phylogenetics;Graphical Models;modularization;computation
DOI:
doi:10.5061/dryad.nt898
摘要:
Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches
Data from: Permutation tests for phylogenetic comparative analyses of high-dimensional shape data: what you shuffle matters
负责人:
关键词:
phylogenetic comparative method;phylogenetic independent contrasts;Plethodon;phylogenetic generalized least squares;Geometric morphometrics
DOI:
doi:10.5061/dryad.2jv17
摘要:
to circumvent this difficulty. One obtains phylogenetic independent contrasts for all variables, and statistically evaluates the linear model by permuti
Data from: The circular nature of recurrent life-cycle events: a test comparing tropical and temperate phenology
负责人:
关键词:
first flowering date;phylogenetic eigenvector regression;K-statistic;circular statistics;Pagel\u2019s lambda;climate seasonality;Mantel correlation;phylogenetic signal
DOI:
doi:10.5061/dryad.64r8fc0
摘要:
ider the circularity of phenological events. Circular statistics is the appropriate approach to calculate phenological parameters, identify phylogenetic signal
Data from: A generalized K statistic for estimating phylogenetic signal from shape and other high-dimensional multivariate data
负责人:
关键词:
phylogenetic comparative method;Morphological Evolution;Plethodon;Macroevolution;Geometric morphometrics
DOI:
doi:10.5061/dryad.8fc86
摘要:
e been developed for quantifying phylogenetic signal in univariate traits and for sets of traits treated simultaneously, and the statistical properties of these
Data from: A method for assessing phylogenetic least squares models for shape and other high-dimensional multivariate data
负责人:
关键词:
Plethodon
DOI:
doi:10.5061/dryad.36df0
摘要:
ter the biological hypotheses they wish to examine. In this article, I propose a new statistical procedure for performing ANOVA and regression models in a phylogenetic
Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
负责人:
关键词:
Simulation;Markov chain Monte Carlo;Bayesian;phylogenetic;Posterior Predictive Distribution;Sequence Evolution;model fit
DOI:
doi:10.5061/dryad.nc866
摘要:
w test statistics for use in posterior predictive assessment of model fit. These test statistics compare phylogenetic inferences from posterior predictive data
Data from: A tale of two phylogenies: comparative analyses of ecological interactions
负责人:
关键词:
Ecology: evolutionary;Macroevolution;Community: structure;Evolution: host\/parasite;Ecology: statistical;Interactions: host\/parasite;phylogeny;Coevolution;statistics
DOI:
doi:10.5061/dryad.jf3tj
摘要:
spatial scales we find that the phylogenetic interaction effect was substantial, indicating that related parasite species were more likely to be found on rela
Data from: Phylogenetic tree estimation with and without alignment: new distance methods and benchmarking
负责人:
关键词:
Pair hidden Markov models;phylogenetic inference;Alignment free;Distance-based phylogenetics;statistical alignment
DOI:
doi:10.5061/dryad.n5r49
摘要:
Phylogenetic tree inference is a critical component of many systematic and evolutionary studies. The majority of these studies are based
Data from: Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Astereae
负责人:
关键词:
reticulate evolution;Astereae;Asteraceae;ddRAD;hybridization;rapid diversification;Diplostephium;introgression;phylogenomics;genome skimming
DOI:
doi:10.5061/dryad.cn74h
摘要:
, and mitochondrial phylogenies. The strong signal of hybridization found by simulations and the D-statistic among genera and inside the main clades of Diplosteph
Data from: Patterns of cranial shape diversification during the phylogenetic branching process of New World monkeys (Primates: Platyrrhini)
负责人:
关键词:
Ecological axes;molecular phylogeny;Body Size;Comparative studies;semilandmarks;Cacajao calvus;Morphometrics;natural selection
DOI:
doi:10.5061/dryad.n626b
摘要:
ve methods. Our statistical analyses demonstrated that the phylogenetic branching process is the most important dimension to understand cranial shape variation among extant platyrrhine

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