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Data from: Dealing with paralogy in RADseq data: in silico detection and single nucleotide polymorphism validation in Robinia pseudoacacia L.
负责人:
关键词:
repetitive region filtering;restriction site-associated DNA sequencing;depth of coverage;black locust;Robinia pseudoacacia
DOI:
doi:10.5061/dryad.qn4br
摘要:
developed here, we were able to validate more than 80% of the SNPs tested by means of individual genotyping, resulting in a readily usable set of 330 SNP
Data from: SNP discovery in wild and domesticated populations of blue catfish, Ictalurus furcatus, using genotyping-by-sequencing and subsequent SNP
负责人:
关键词:
Aquaculture Conservation Genetics Fisheries Management Population Genetics - Empirical
DOI:
doi:10.5061/dryad.4nf1c
摘要:
r individual and number of individuals genotyped by GBS. Putative SNPs were validated in the discovery population and in two additional populations not use
Data from: Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology
负责人:
关键词:
Eurasian perch SNP development and validation de novo assembly next-generation sequencing population genomics DNA pooling
DOI:
doi:10.5061/dryad.s2405
摘要:
molecular evolution and evolutionary biology to animal and plant breeding and forensics. In this study, we describe the development of restriction-site associated DNA
Data from: Deep sequencing of a candidate region harboring the SOX9 gene for the canine XX disorder of sex development
负责人:
Grzemski, Adrian
关键词:
dog intersexuality DSD SOX9 MAGI2 CNV lincRNA RevSex
DOI:
doi:10.5061/dryad.65th7
摘要:
and two blocks of an elevated heterozygosity. An initial next-generation sequencing analysis showed an association with two SNPs, but validation in larger cohorts
Data from: Association between COL11A1 (rs1337185) and ADAMTS5 (rs162509) gene polymorphisms and lumbar spine pathologies in Chinese Han populati
负责人:
关键词:
Disc degeneration;Environmental factor;genetics;single nucleotide polymorphism
DOI:
doi:10.5061/dryad.5cd20
摘要:
on (LDD) in Indians. To validate the association between these SNPs and specific lumbar spine pathologies, we performed a case-control study
Data from: Expected genotype quality and diploidized marker data from genotyping-by-sequencing of Urochloa spp. tetraploids
负责人:
关键词:
DOI:
doi:10.5061/dryad.4j2c7h6
摘要:
-validation revealed that missing genotypes were imputed by the Random Forest method with a median accuracy of 0.85, regardless of heterozygote frequency. Usi
Data from: Estimations of linkage disequilibrium, effective population size and ROH-based inbreeding coefficients in Spanish Churra sheep usi
负责人:
Arranz, Juan José
关键词:
SNPs HD-Chip Imputation Linkage disequilibrium Churra sheep Inbreeding
DOI:
doi:10.5061/dryad.pr7gh
摘要:
In this study, the availability of the Ovine HD SNP BeadChip (HD-chip) and the development of an imputation strategy provided an opportunity to furt
Data from: Genomic data reveal deep genetic structure but no support for current taxonomic designation in a grasshopper species complex
负责人:
关键词:
species delimitation;Omocestus navasi;Omocestus antigai;Integrative species delimitation;Landscape Genetics;ddRADseq;phylogenomic inference;Geometric morphometrics
DOI:
doi:10.5061/dryad.249v096
摘要:
pine vs. Mediterranean-montane habitats). To validate current taxonomic designations, test species boundaries, and understand the factors that have cont

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