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Data from: Heterogeneity in genetic diversity among non-coding loci fails to fit neutral coalescent models of population history
- 负责人:
- DOI:
- doi:10.5061/dryad.nv5v1v59
- 摘要:
- Inferring aspects of the population histories of species using coalescent analyses of non-coding nuclear DNA has grown in popularity. Thes
Data from: Comparison of methods for molecular species delimitation across a range of speciation scenarios
- 负责人:
- DOI:
- doi:10.5061/dryad.739bs
- 摘要:
- e designed for the analysis of single-locus data but are often applied to concatenations of multilocus data. In contrast, the Bayesian multispecies coalescent approa
Data from: Species level phylogeny and polyploid relationships in Hordeum (Poaceae) inferred by next-generation sequencing and in-silico cloning
- 负责人:
- DOI:
- doi:10.5061/dryad.fn2nt
- 摘要:
- i separately and for a concatenated data matrix of all loci. For diploid taxa, a Bayesian concordance analysis and a coalescent-based dated species
Data from: Evaluating multilocus Bayesian species delimitation for discovery of cryptic mycorrhizal diversity
- 负责人:
- DOI:
- doi:10.5061/dryad.2hf40
- 摘要:
- lity of modern multilocus Bayesian coalescent-based methods for delimiting cryptic fungal diversity in the orchid mycorrhiza morphospecies Serendipita vermifera
Data from: The multispecies coalescent model outperforms concatenation across diverse phylogenomic
- 负责人:
- DOI:
- doi:10.5061/dryad.7q6q3s0
- 摘要:
- on, and multispecies coalescent (MSC) models across 47 phylogenomic data sets collected across tree of life. Tests for substitution models and the concatenation assumpti
Data from: Coestimating reticulate phylogenies and gene trees from multilocus sequence data
- 负责人:
- Nakhleh, Luay
- 关键词:
- Multispecies network coalescent reticulation incomplete lineage sorting phylogenetic network Bayesian inference RJMCMC
- DOI:
- doi:10.5061/dryad.3h185
- 摘要:
- The multispecies network coalescent (MSNC) is a stochastic process that captures how gene trees grow within the branches of a phylogeneti
Data from: Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays
- 负责人:
- DOI:
- doi:10.5061/dryad.1786
- 摘要:
- nt innovations for dating speciation events with the analytical power of species trees, where multilocus data are considered in a coalescent cont
Data from: A rapid and scalable method for multilocus species delimitation using Bayesian model comparison and rooted triplets
- 负责人:
- DOI:
- doi:10.5061/dryad.3cb25
- 摘要:
- . However, current statistical methods based on a multispecies coalescent framework are computationally demanding, because of the number of poss
Data from: Coalescent-based species delimitation approach uncovers high cryptic diversity in the cosmopolitan lichen-forming fungal genus
- 负责人:
- 关键词:
- Protoparmelia;BPP;coalescent-based models;Multilocus phylogeny;species delimitation;cryptic species
- DOI:
- doi:10.5061/dryad.0q515
- 摘要:
- ng two coalescent-based species delimitation methods – BP&P and spedeSTEM. Our results suggest the presence of a tropical and an extra-tropical lineage, and eleven pr
Data from: The hidden history of the snowshoe hare, Lepus americanus: extensive mitochondrial DNA introgression inferred from multilocus genetic variation
- 负责人:
- DOI:
- doi:10.5061/dryad.21f62
- 摘要:
- specimens). A multilocus-multispecies coalescent-based phylogeny suggests that L. americanus diverged ~2.7 Mya and that L. californicus and L. townsendii