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Data from: Genomic data detect corresponding signatures of population size change on an ecological time scale in two salamander species
负责人:
关键词:
genetic monitoring;temporal samples;Amphibian decline;Ambystoma opacum;Ambystoma talpoideum;Ambystoma;demographic inference;coalescent
DOI:
doi:10.5061/dryad.q74p1
摘要:
ally-based demographic inference on salamander species with documented population declines (Ambystoma talpoideum) and expansions (A. opacum); patterns that hav
Data from: Genotype-free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data
负责人:
关键词:
ANGSD;Ficedula hypoleuca;genotyping error;RADseq;demographic inference;allele frequencies
DOI:
doi:10.5061/dryad.1sd556t
摘要:
y estimation affect demographic inference from empirical RADSeq data. Using the well-studied pied flycatcher (Ficedula hypoleuca) as a study system, we compare
Data from: The consequences of not accounting for background selection in demographic inference
负责人:
关键词:
Natural Selection and Contemporary Evolution;Evolutionary Theory;Population Genetics - Theoretical;population dynamics
DOI:
doi:10.5061/dryad.37hc1
摘要:
simulations with BGS to determine biases and behaviour of demographic inference using an approximate Bayesian approach. We find that results can be positively
Data from: Model selection as a tool for phylogeographic inference: an example from the willow Salix melanopsis
负责人:
关键词:
Salix melanopsis;Pleistocene refugia;solution-based capture probes;Genetic structure;Illumina sequencing;Holocene;phylogeography;Pleistocene
DOI:
doi:10.5061/dryad.sm635
摘要:
Phylogeographic inference has typically relied on analyses of data from one or a few genes to provide estimates of demography and population
Data from: The demographic history of populations experiencing asymmetric gene flow: combining simulated and empirical data.
负责人:
关键词:
demographic changes;source-sink dynamics;Gobio gobio;ABC;Squalius cephalus;Leuciscus burdigalensis;Phoxinus phoxinus;Fish;Population Genetics - Theoretical;Holocene;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.5sc31
摘要:
gene flow. Here, we combined simulated and empirical data to test whether asymmetric gene flow affects the inference of past demographic changes. Throug
Data from: Inferring the demographic history of Drosophila subobscura from nucleotide variation at regions not affected by chromosomal inversions
负责人:
关键词:
Nucleotide polymorphism;Drosophila;demographic change;multilocus analysis
DOI:
doi:10.5061/dryad.j126v
摘要:
h the single-gene and chromosomal inversion levels. It is therefore important to infer its demographic history since previous information indicated tha
Data from: Demographic inference from whole-genome and RAD sequencing data suggests alternating human impacts on goose populations since the las
负责人:
关键词:
effective population size;demographic history;pink-footed goose;Birds;anthropogenic effects;Last Glaciation;Anser brachyrhynchus
DOI:
doi:10.5061/dryad.c4r81
摘要:
st, genomic data confirmed the existence of two separate populations: western (Iceland) and eastern (Svalbard/Denmark). Second, emographic inference suggests tha
Data from: Identifying loci under selection against gene flow in isolation with migration models
负责人:
关键词:
Oryctolagus cuniculus;MCMC;demographic history;coalescent;Isolation with Migration;natural selection
DOI:
doi:10.5061/dryad.vr7bb
摘要:
may be poorly fitted by conventional neutral model approaches to demographic inference, which treat all loci as equally subject to forces of genetic
Data from: A multilocus sequencing approach reveals the cryptic phylogeographical history of Phyllodoce nipponica?Makino (Ericaceae)
负责人:
关键词:
alpine plants;Phyllodoce nipponica;EST;multilocus sequences;nDNA;phylogeography;Pleistocene
DOI:
doi:10.5061/dryad.62s00
摘要:
del suggests that the north–south divergence originated from Pleistocene vicariance. In addition, the demographic parameters showed a lack of chloroplast
Data from: Background selection and biased gene conversion affect more than 95% of the human genome and bias demographic inferences
负责人:
关键词:
DOI:
doi:10.5061/dryad.t76fk80
摘要:
are also affected, albeit to different degrees. Their use for demographic inference can lead to strong biases. However, by conditioning

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