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Data from: Cost-effective enrichment hybridization capture of chloroplast genomes at deep multiplexing levels for popula
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关键词:
DNA probes long range PCR MiSeq next generation sequencing plastomes whole chloroplast sequencing
DOI:
doi:10.5061/dryad.t6b05
摘要:
methods. In this study, we develop an easy and cost-effective protocol for in-solution enrichment hybridization capture of complete chloroplast
Data from: Dated tribe-wide whole chloroplast genome phylogeny indicates recurrent hybridizations within Triticeae
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关键词:
DOI:
doi:10.5061/dryad.25743
摘要:
in the framework of our results. Monophyly of Triticeae chloroplasts could not be confirmed, as either Bromus or Psathyrostachys captured a chloroplast fro
Data from: A new species and introgression in eastern Asian hemlocks (Pinaceae: Tsuga)
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关键词:
Chloroplast capture;quantitative morphology;island endemic;Tsuga ulleungensis;plastid genomes
DOI:
doi:10.5061/dryad.2r12j
摘要:
de of T. diversifolia and hemlocks fromUlleungdo. These divergent topologies suggest chloroplast capture of T. chinensis by Japanese T. sieboldii. Ulleungdo hemlocks ar
Data from: A phylogeny of the genus Amaranthus (Amaranthaceae), based on several low-copy nuclear loci and chloroplast regions
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关键词:
dioecy;Chloroplast capture;Amaranthus;pigweeds;Amaranthus palmeri;Topology testing
DOI:
doi:10.5061/dryad.156j4
摘要:
des based on nuclear or chloroplast data, suggesting a chloroplast capture event. These results will provide a basis for further exploration of the evolution
Data from: Intraspecific haplotype diversity in Cherleria sedoides L. (Caryophyllaceae) is best explained by chloroplast capture fro
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关键词:
range expansion;Cherleria sedoides;Minuartia;cpDNA;Hybridisation;Holocene;Caryophyllaceae;Pleistocene
DOI:
doi:10.5061/dryad.sm95d
摘要:
chloroplast haplotype groups, one widespread (WH) and one present only in some populations in the Alps (AH). We investigated whether this hap
Data from: Rumbling orchids: how to assess divergent evolution between chloroplast endosymbionts and the nuclear host
负责人:
关键词:
Orchids;organelle-nucleus-coevolution;topological incongruence;Chloroplast capture;Cyrtopodiinae;Eulophiinae;cophylogenetic tool;hybridization;Satyrium;Catasetinae;Cymbidiinae
DOI:
doi:10.5061/dryad.q6s1f
摘要:
data sets often provide valuable information on evolutionary processes such as chloroplast capture following hybridization, incomplete lineage sorting
Data from: Identifying genetic markers for a range of phylogenetic utility–from species to family level
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关键词:
locus selection;Eucalyptus;marker discovery;Next-generation sequencing;exon capture;phylogeny;Melaleuca;Mytraceae
DOI:
doi:10.5061/dryad.p20km22
摘要:
that allows identification of many low copy candidate loci from across the nuclear and chloroplast genomes, design probes for target capture
Data from: Understanding the spectacular failure of DNA barcoding in willows (Salix): Does this result from a trans-specific selective sweep?
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关键词:
Salix;Chloroplast capture;phylogeography;specimen records;molecular dating;Malpighiales
DOI:
doi:10.5061/dryad.qf6t5
摘要:
), or of repeated plastid capture events, possibly including a historical selective sweep of haplotype 1* across taxonomic sections. The former is unli
Data from: A target enrichment method for gathering phylogenetic information from hundreds of loci: an example from the Compositae
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关键词:
Next-generation sequencing;exon capture;orthologs;Compositae;base tree;conserved;phylogenomics
DOI:
doi:10.5061/dryad.gr93t
摘要:
-tree based on 10 chloroplast loci that has several major unresolved nodes. We describe the development of an approach that enables the rapid sequencing
Data from: Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages
负责人:
关键词:
phylogenetic analysis;Saxifraga sect. Porphyrion subsect. Oppositifoliae;Chloroplast capture;taxonomy;Saxifragaceae;hybridization;Saxifraga oppositifolia s.l.;AFLPs
DOI:
doi:10.5061/dryad.8d820
摘要:
ween data derived from nuclear and plastid genomes. Hybridization, which is known to occur among almost all taxa of this group when growing in sympatry, seems

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