A field device commissioning system includes a commissioning tool, a communication module and an IO module. The commissioning tool is configured to communicate with a client in a plurality of communications. The commissioning tool is configured to perform a parallel execution of executing a plurality of loop processing logics that includes at least one input loop check or at least one output loop check in parallel for all of a plurality of channels which belongs to each slot in each unit, in accordance with the plurality of request for executions of loop checks from the client in the plurality of communications. The commissioning tool is configured to perform in series a plurality of the sequential executions for a plurality of the slots in each unit, wherein each execution including the plurality of loop processing logics. The commissioning tool may be configured to perform in series a plurality of sets of the plurality of the sequential execution for a plurality of the units.