Systems and methods for providing a medical tool cleaning and/or lubrication system are provided. A cleaning system may include an attachment interface configured to receive one or more medical device tool modules. The attachment interface may include one or more input or output couplings which are configured to connect the attachment interface to a reservoir which provides one or more fluids in an input/output pathway for the circulation of the fluids into the one or more medical device tool modules. The cleaning system may also include one or more fluid reservoirs which contain fluid to be circulated through the one or more medical device tool modules. The cleaning system may further comprise a driver system configured to at least partially actuate components of connected medical device tool modules while the modules are being cleaned.