A method of acquiring scatter data and image projection data in computed tomography is provided that includes attenuating a radiation source using a pattern of blockers arranged to provide blocked and unblocked regions of the radiation source, and acquiring image data and scatter data of a target using an imaging device. A scatter map in the projection image can be estimated by interpolation and/or extrapolation of the projection image using an appropriately programmed computer, subtracting the estimated scatter map from the projection image to obtain scatter-corrected projections, reconstructing a CBCT volume using a total variation regularization algorithm, and applying an iterative regularization process to suppress the noise level on the reconstructed CBCT volume. Reconstructing a CBCT volume can include using a total variation regularization algorithm and applying an iterative regularization process to suppress the noise level on the reconstructed CBCT volume, where scatter-induced artifacts are corrected in the projection image.
