Differential illumination systems and methods selectively provide light having different spectrums in an aviary system for housing animals located within an enclosure, and in the enclosure. A first light source produces light with a first spectrum, and illuminates an internal volume of the aviary system. A second light source produces light with a second spectrum different from the first spectrum, and illuminates the enclosure outside of the aviary system. The first spectrum can have a higher red component than the second spectrum to encourage chicken to lay eggs inside of the aviary system, and the second spectrum can have a higher blue component than the first spectrum to discourage chicken from laying eggs outside of the aviary system.