A method and system of configuring wind turbines is provided. The method and system includes generation of a plurality of configuration profiles. Thereafter, one of the configuration profiles is set as the active configuration profile and the rest of them are stored as shadow configuration profiles. Further, the performance of the active configuration profile and the shadow configuration profiles are monitored. Based on the performance of the configuration profiles, a candidate configuration profile is chosen. Further, a delta configuration profile is generated by eliminating the duplicate parameters from the candidate configuration profile and the active configuration profile. Further, the active configuration profile is updated with the delta configuration profile.
