A system for controlling the position of an articulated robotic arm in a robotic catheter procedure system, includes an articulated robotic arm, a first controller coupled to the articulated robotic arm and a patient table. The patient table includes a user interface and a second controller coupled to the user interface and the first controller. The second controller is programmed to generate a control signal in response to a user input received using the patient table user interface, the user input indicating a change in position of the patient table. The second controller is also programmed to transmit the control signal to the patient table and to transmit the control signal to the first controller.