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Management of acoustic metadata for bioacoustics

作   者:
Roch, Marie A.Batchelor, HeidiBaumann-Pickering, SimoneBerchok, Catherine L.Cholewiak, DanielleFujioka, EiGarland, Ellen C.Herbert, SeanHildebrand, John A.Oleson, Erin M.Van Parijs, SofieRisch, DeniseSirovic, AnaSoldevilla, Melissa S.
作者机构:
NOAA CA 92093 USA CA 92182 USA Silver Spring NC 27708 USA Nicholas Sch Environm Natl Marine Fisheries Serv La Jolla 9500 Gilman Dr Fisheries Sci Ctr Dept Comp Sci Durham 5500 Campanile Dr 1315 East West HighwayDuke Univ POB 90328 MD 20910 USA San DiegoUniv Calif San Diego Scripps Inst OceanogSan Diego State Univ Marine Geospatial Ecol Lab
关键词:
BioacousticsCall spatiotemporal databaseMetadataEnvironmental data access
期刊名称:
Ecological informatics: an international journal on ecoinformatics and computational ecology
i s s n:
1574-9541
年卷期:
2016 年 31 卷
页   码:
122-136
页   码:
摘   要:
Recent expansion in the capabilities of passive acoustic monitoring of sound-producing animals is providing expansive data sets in many locations. These long-term data sets will allow the investigation of questions related to the ecology of sound-producing animals on time scales ranging from diel and seasonal to inter-annual and decadal. Analyses of these data often span multiple analysts from various research groups over several years of effort and, as a consequence, have begun to generate large amounts of scattered acoustic metadata. It has therefore become imperative to standardize the types of metadata being generated. A critical aspect of being able to learn from such large and varied acoustic data sets is providing consistent and transparent access that can enable the integration of various analysis efforts. This is juxtaposed with the need to include new information for specific research questions that evolve over time. Hence, a method is proposed for organizing acoustic metadata that addresses many of the problems associated with the retention of metadata from large passive acoustic data sets. A structure was developed for organizing acoustic metadata in a consistent manner, specifying required and optional terms to describe acoustic information derived from a recording. A client-server database was created to implement this data representation as a networked data service that can be accessed from several programming languages. Support for data import from a wide variety of sources such as spreadsheets and databases is provided. The implementation was extended to access Internet-available data products, permitting access to a variety of environmental information types (e.g. sea surface temperature, sunrise/sunset, etc.) from a wide range of sources as if they were part of the data service. This metadata service is in use at several institutions and has been used to track and analyze millions of acoustic detections from marine mammals, fish, elephants, and anthropogenic sound sources. (C) 2015 The Authors. Published by Elsevier B.V. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
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