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Data from: Current methods for automated filtering of multiple sequence alignments frequently worsen single-gene phylogenetic inference
负责人:
关键词:
phylogenetic inference;alignment trimming;multiple sequence alignment;alignment filtering;molecular phylogeny;phylogenetics;phylogeny
DOI:
doi:10.5061/dryad.pc5j0
摘要:
ring approaches have been proposed, but despite their popularity, a systematic and comprehensive comparison of different alignment filtering methods on real data ha
Data from: Phylogeny, palaeontology, and primates: do incomplete fossils bias the tree of life?
负责人:
关键词:
taphonomy;Darwinius;artificial extinction;Mammalia;phylogeny reconstruction;Primates;Eocene;Cenozoic;data combination;missing data;Strepsirhini;Haplorhini
DOI:
doi:10.5061/dryad.4g42q
摘要:
Paleontological systematics relies heavily on morphological data that have undergone decay and fossilization. Here, we apply a heuristic mea
Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
负责人:
关键词:
Simulation;Markov chain Monte Carlo;Bayesian;phylogenetic;Posterior Predictive Distribution;Sequence Evolution;model fit
DOI:
doi:10.5061/dryad.nc866
摘要:
Systematic phylogenetic error caused by the simplifying assumptions made in models of molecular evolution may be impossible to avoid enti
Data from: A phylogeny and revised classification of Squamata, including 4161 species of lizards and snakes
负责人:
关键词:
Reptiles;missing data;systematics;Likelihood Support Measures;Lacertilia;Supermatrices;Serpentes;phylogenetics;Squamata;Amphisbaenia
DOI:
doi:10.5061/dryad.82h0m
摘要:
ons of terrestrial vertebrates, but no studies have attempted to reconstruct a phylogeny for the group with large-scale taxon sampling. Such an estimate is invaluable
Data from: The circular nature of recurrent life-cycle events: a test comparing tropical and temperate phenology
负责人:
关键词:
first flowering date;phylogenetic eigenvector regression;K-statistic;circular statistics;Pagel\u2019s lambda;climate seasonality;Mantel correlation;phylogenetic signal
DOI:
doi:10.5061/dryad.64r8fc0
摘要:
of phenological data underestimates the phylogenetic signal in plant phenology. Using the proposed circular transformation for non-resting tropical ecosystems and resti
Data from: Novel approaches for phylogenetic inference from morphological data and total-evidence dating in squamate reptiles (lizards, snakes
负责人:
关键词:
reversals;convergence;Total Evidence;Total Evidence;phylogeny;congruence;morphological phylogenetics;systematics;morphology;Squamata;dating;molecular discordance;Molecular Data
DOI:
doi:10.5061/dryad.dp3js
摘要:
d reversal for many phylogenetically informative characters, and significantly increases likelihoods in the empirical datasets. Despite this, the phylogeny
Data from: Genome-wide SNP markers breathe new life into phylogeography and species delimitation for the problematic short-necked turtles (Chelidae
负责人:
关键词:
species delimitation;Emydura macquarii;tokogenesis;phylogeny;cladogeneisis;Pleistocene to present
DOI:
doi:10.5061/dryad.t2c668d
摘要:
ydura macquarii, whose systematics has so far defied resolution, to bring to light a dynamic system of incipient species held back by low level and episodic
Data from: Genetic differentiation in the stingless bee, Scaptotrigona xanthotricha Moure, 1950 (Apidae, Meliponini): a species with wide
负责人:
关键词:
microsatellites;Conservation genetics and biodiversity;Meliponini;Genetic structure;Molecular systematics and phylogenetics;Genetic divergence;Holocene;Bees
DOI:
doi:10.5061/dryad.03jd7
摘要:
h revealed 7.72% of the variation occurring between groups. The Mantel correlation between a genetic differentiation matrix and a geographic distance mat
Data from: Nuptial gift chemistry reveals convergent evolution correlated with antagonism in mating systems of harvestmen (Arachnida, Opiliones)
负责人:
Boyer, Sarah L.
关键词:
Phylogenetics Mating Systems Chemical Ecology
DOI:
doi:10.5061/dryad.550nd48
摘要:
nd as such contributes to our understanding of the evolution of reproductive diversity and the participant role of nuptial gift chemistry in mating system transitions.

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