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Data from: Understanding the spectacular failure of DNA barcoding in willows (Salix): Does this result from a trans-specific selective sweep?
负责人:
关键词:
Salix;Chloroplast capture;phylogeography;specimen records;molecular dating;Malpighiales
DOI:
doi:10.5061/dryad.qf6t5
摘要:
identification system. We surveyed two to seven plastid genome regions (~3.8 kb; ~3% of the genome) from 71 Salix species across all five subgenera, to assess thei
Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
BFs to assess data combinability using an empirical data set comprising 56 plastid genes from the green algal order Volvocales. We also discuss
Data from: Genome skimming by shotgun sequencing helps resolve the phylogeny of a pantropical tree family
负责人:
关键词:
Tropical trees;Chrysobalanus icaco;Hirtella physophora;Licania sprucei;Next-generation sequencing;Hirtella racemosa;organellar genome;Licania alba;Licania heteromorpha;Parinari campestris;phylogenomics;Couepia guianensis
DOI:
doi:10.5061/dryad.78p90
摘要:
e able to assemble the nuclear ribosomal cluster (nrDNA), the complete plastid genome (ptDNA) and a large fraction of the mitochondrial genome (mtDNA) with approximate
Data from: Reduced genetic diversity, increased isolation and multiple introductions of invasive giant hogweed in the western Swiss Alps
负责人:
关键词:
Heracleum;plastid DNA;Bayesian clustering;microsatellites;invasive species;Heracleum mantegazzianum;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.1237
摘要:
with plastid DNA markers and sequences. On both nuclear and plastid genomes, native populations exhibited significantly higher levels of genetic diversity compared
Data from: A transcriptome screen for positive selection in domesticated breadfruit and its wild relatives (Artocarpus spp.)
负责人:
Laricchia, Kristen M.
关键词:
breadfruit carotenoids domestication MADS-box positive selection transcriptome underutilized crops
DOI:
doi:10.5061/dryad.r7q2s
摘要:
for localization to plastids. Nucleotide sites and individuals under positive selection were discovered in MADS-box genes and carotenoid biosynthesis genes, with se
Data from: Introduced Scotch broom (Cytisus scoparius) invades the genome of native populations in vulnerable heathland habitats
负责人:
关键词:
conservation genetics;Cytisus scoparius;hybridization;invasive species;Holocene;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.p49q0
摘要:
with plastid SSR and indel markers to investigate the level and direction of gene flow between invasive and native heathland C. scoparius. Analyses
Data from: Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrage
负责人:
关键词:
phylogenetic analysis;Saxifraga sect. Porphyrion subsect. Oppositifoliae;Chloroplast capture;taxonomy;Saxifragaceae;hybridization;Saxifraga oppositifolia s.l.;AFLPs
DOI:
doi:10.5061/dryad.8d820
摘要:
ween data derived from nuclear and plastid genomes. Hybridization, which is known to occur among almost all taxa of this group when growing in sympatry, seems
Data from: Molecular evolution accompanying functional divergence of duplicated genes along the plant starch biosynthesis pathway
负责人:
关键词:
DOI:
doi:10.5061/dryad.vj7nr
摘要:
glycogen metabolism shortly after plastid endosymbiosis and was redirected to the plastid stroma during the green lineage divergence. The SBP is a complex network
Data from: Molecular dating, evolutionary rates, and the age of the grasses
负责人:
关键词:
divergence time;phylogeny;molecular dating;Poaceae;mutation rate
DOI:
doi:10.5061/dryad.t5v58
摘要:
t phylogenetic markers extracted from complete nuclear genomes can be a useful complement to the more commonly used plastid markers. However, esti
Data from: Resolution of the ordinal phylogeny of mosses using targeted exons from organellar and nuclear genomes
负责人:
关键词:
mosses;HybSeq;targeted enrichment;phylogenomics;Evolutionary Rate
DOI:
doi:10.5061/dryad.tj3gd75
摘要:
versus plastid genes are much higher in mosses than in seed plants, consistent with the emerging concept of evolutionary dynamism in mosses. Our result

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