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Data from: Information dropout patterns in restriction site associated DNA phylogenomics and a comparison with multilocus Sanger data in a species
负责人:
关键词:
RAD phylogenomics;RAD-Sequencing;allelic dropout;SNP dropout;Geometridae;Locus dropout;Lepidoptera;Parsimony informative SNPs;molecular systematics;Eupithecia;ddRAD Sequencing;RAD sequencing
DOI:
doi:10.5061/dryad.474nd
摘要:
with our data our expectation of a positive correlation between them. We conclude that RAD methods provide a powerful tool for phylogenomics at an intermediate
Data from: Exploring evolutionary relationships across the genome using topology weighting
负责人:
关键词:
incomplete lineage sorting;Neurospora;population genomics;Heliconius;introgression;phylogenomics
DOI:
doi:10.5061/dryad.4jm83
摘要:
and real genomic data. Overall, we show that this is an informative and versatile approach, suitable for exploring relationships in al
Data from: From cacti to carnivores: improved phylotranscriptomic sampling and hierarchical homology inference provide further insight int
负责人:
关键词:
Caryophyllales;Phylotranscriptomic;homology;coalescent;Supermatrix;gene tree conflict;phylogenomics
DOI:
doi:10.5061/dryad.470pd
摘要:
in Caryophyllales. Methods— We generated 84 transcriptomes and combined these with 224 publicly available transcriptomes to perform a phylogenomic
Data from: Phylogenomic insights into the evolution of stinging wasps and the origins of ants and bees
负责人:
关键词:
Mesozoic;Next-generation sequencing;ultraconserved elements;social insects;Anthophila;Hymenoptera;taxon sampling;Cenozoic;molecular systematics;phylogenomics;Aculeata;Apocrita
DOI:
doi:10.5061/dryad.r8d4q
摘要:
, including the phylogenetic affinities of ants and bees [5–7]. We used ultraconserved element (UCE) phylogenomics [7,12] to resolve relationships amo
Data from: Anchored phylogenomics improves the resolution of evolutionary relationships in the rapid radiation of Protea L.
负责人:
关键词:
Coalescence;Radiation;Anchored phylogenomics;phylogenetics;Proteaceae;Protea
DOI:
doi:10.5061/dryad.vj32s
摘要:
ous nuclear loci using anchored phylogenomics. We compare several approaches for building species trees, and explore gene tree–species tree discrepancies
Data from: Mitochondrial phylogenomics of Hemiptera reveals adaptive innovations driving the diversification of true bugs
负责人:
关键词:
mitochondrial genome;phylogeny;Ancestral character state reconstruction;Hemiptera;evolutionary history;Mitochondrial phylogenomics
DOI:
doi:10.5061/dryad.13m7r
摘要:
the phylogeny and evolutionary history of Hemiptera, we carried out the most comprehensive mitogenomics analysis on the richest taxon sampling to date covering al
Data from: Phylogenomics resolves evolutionary relationships among ants, bees, and wasps
负责人:
关键词:
phylogenomics transcriptomics eusociality evolution of aculeates
DOI:
doi:10.5061/dryad.jt440
摘要:
. Phylogeny is crucial to understanding the evolution of the salient features of these insects, including eusociality. Yet the phylogenetic relationships amo
Data from: Reconciling molecular phylogeny, morphological divergence and classification of Madagascan narrow-mouthed frogs (Amphibia: Microhylidae)
负责人:
关键词:
Anilany gen. nov;Stumpffia;Rhombophryne;phylogeny;Cophyla;Platypelis;Holocene;Cophylinae
DOI:
doi:10.5061/dryad.1b2k5
摘要:
A recent study clarified several aspects of microhylid phylogeny by combining DNA sequences from Sanger sequencing and anchored phylogenomics, alt
Data from: Nuclear genetic analysis of the red fox across its trans-Pacific range
负责人:
关键词:
admixture;Molecular systematics and phylogenetics;Vulpes fulva;V. vulpes Subject area: Population structure and phylogeography;CanineHD BeadChip;phylogenomics;speciation;Vulpes vulpes
DOI:
doi:10.5061/dryad.sq28254
摘要:
research. However, its phylogeography remains unclear. Previously, mitochondrial DNA and small numbers of nuclear loci provided discordant views. Both markers indic
Data from: Restructuring higher taxonomy using broad-scale phylogenomics: the living Ophiuroidea
负责人:
关键词:
exon capture;Deep sea;Marine;Mezozoic;Temporal-banding;Ophiuroidea;Invertebrates;Cenozoic;Post-Paleozoic;phylogenomics
DOI:
doi:10.5061/dryad.rb334
摘要:
species spread across the known taxonomic diversity. The topology of the major lineages was robust to taxon sampling, exon-sampling, models and methods

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