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Data from: ModelOMatic: fast and automated comparison between RY, nucleotide, amino acid, and codon substitution models
负责人:
关键词:
model selection;phylogenetics;substitution models;AIC
DOI:
doi:10.5061/dryad.gq0pb
摘要:
Molecular phylogenetics is a powerful tool for inferring both the process and pattern of evolution from genomic sequence data. Statistic
Data from: How species longevity, intraspecific morphological variation, and geographic range size are related: a comparison using late Cambrian
负责人:
关键词:
duration;evolutionary rates;Cambrian;Pterocephaliidae;Morphological Evolution;Trilobita;phylogenetic signal;paleobiology
DOI:
doi:10.5061/dryad.rm73j
摘要:
tend to have less intraspecific variation. Phylogenetic effects were also explored and found not to determine the association between these var
Data from: The emergence of the lobsters: phylogenetic relationships, morphological evolution and divergence time comparisons of an ancient gr
负责人:
关键词:
Divergence Dating;morphology;phylogenetics;molecular;decapods;lobsters
DOI:
doi:10.5061/dryad.4v875
摘要:
ra were recovered as poly- or paraphyletic. A rich fossil history coupled with dense taxon coverage allowed us to estimate and compare divergence ti
Data from: Comparative phylogeographic inference with genome-wide data from aggregated population-pairs
负责人:
关键词:
population genetics;phylogeography;Evolutionary genomics;gene flow
DOI:
doi:10.5061/dryad.xksn02vbw
摘要:
lized organelle genetic data and involved qualitative comparisons of phylogenetic patterns to evaluate hypotheses of shared and variable evolutionar
Data from: Information criteria for comparing partition schemes
负责人:
关键词:
partition scheme comparison;model comparison;information criteria;multilocus analysis;AIC;AICP;BICP;BIC;phylogenomics
DOI:
doi:10.5061/dryad.qq586
摘要:
estimates that did not benefit from sharing information across partitions. Phylogenetic partitioning decisions are often made by applying
Data from: Taxonomic, phylogenetic and trait betadiversity in South American hummingbirds
负责人:
关键词:
community structure;species diversity;Community Ecology;Biogeography;biodiversity
DOI:
doi:10.5061/dryad.1qg13
摘要:
Comparison of the taxonomic, phylogenetic and trait dimensions of betadiversity may uncover the mechanisms that generate and maintain biodiversity
Data from: Squamate Conserved Loci (SqCL): a unified set of conserved loci for phylogenomics and population genetics of squamate reptiles
负责人:
Singhal, Sonal
关键词:
target capture phylogenomics comparative population genomics squamate reptiles Reptiles
DOI:
doi:10.5061/dryad.r0q02
摘要:
lity of these loci for both phylogenomic and population genomic questions, provide a comparison among these locus sets of their relative usefulness, and sugge
Data from: The multispecies coalescent model outperforms concatenation across diverse phylogenomic
负责人:
关键词:
Bayesian model validation;coalescent prior;congruent gene trees;independent prior;Bayes factor;Athens;posterior predictive simulation;Metazoa
DOI:
doi:10.5061/dryad.7q6q3s0
摘要:
on and comparison in phylogenomic data analysis, as well as the need for further improvements of multilocus models and computational tools for phylogenetic inference.
Data from: An in silico comparison of protocols for dated phylogenomics
负责人:
关键词:
exon-capture;Primates;UCE;RADseq;phylogenomics
DOI:
doi:10.5061/dryad.8hs71
摘要:
ng published genomes from 23 primate species, we make a standardized comparison of four of the most frequently used protocols in phylogenomics, viz., targe
Data from: Posterior predictive Bayesian phylogenetic model selection
负责人:
关键词:
posterior predictive;Bayesian;model selection;phylogenetics;L-measure;conditional predictive ordinate;log pseudomarginal likelihood
DOI:
doi:10.5061/dryad.6b7c1
摘要:
and CPO add new perspectives to Bayesian phylogenetic model selection based on the predictive abilities of models, and complement the perspective provided

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