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Data from: Genome-wide analyses suggest parallel selection for universal traits may eclipse local environmental selection in a highly mobile
负责人:
关键词:
single nucleotide polymorphism;wolf;Genome-wide association study;Environmental selection;Canis lupus;CanineHD BeadChip microarray
DOI:
doi:10.5061/dryad.p6598
摘要:
n = 9, Ukrainian Steppe n = 11). Our analyses combined identification of outlier loci with findings from genome-wide association study of individual genomic profiles
Data from: Genetic divergence with ongoing gene flow is maintained by the use of different hosts in phytophagous ladybird beetles genus
负责人:
关键词:
ecological speciation;isolation-with-migration model;AFLP;genome scan;Henosepilachna;host range evolution;MIGRATE
DOI:
doi:10.5061/dryad.n7f6q
摘要:
w fractions of loci representing approximately 1% of all loci as different-host associated outliers. These results suggest that these three species ha
Data from: High degree of genetic differentiation in marine three-spined sticklebacks (Gasterosteus aculeatus)
负责人:
关键词:
genomic heterogeneity;effective population size;population differentiation;FST;microsatellite;Marine
DOI:
doi:10.5061/dryad.493jh
摘要:
ences in the directionally selected loci, whereas four were identified with the neutral loci. Allelic variation in several loci exhibited significant associ
Data from: Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod
负责人:
Therkildsen, Nina O.
关键词:
selection temporal historical DNA genome scan fisheries-induced evolution
DOI:
doi:10.5061/dryad.4v0c5
摘要:
to be fisheries induced. Interestingly, however, largely nonoverlapping sets of loci were temporal outliers in the different populations and outliers from the 1928
Data from: Population structure, genetic connectivity, and adaptation in the Olympia oyster (Ostrea lurida) along the west coast of North America
负责人:
Silliman, Katherine
关键词:
population genomics connectivity outlier loci Olympia oyster genotype-by-sequencing Fisheries Management
DOI:
doi:10.5061/dryad.114j8m1
摘要:
and analyzed separately from the remaining neutral loci. While strong population structure was observed on a regional scale in both neutral and outlier marker
Data from: Bayesian estimation of genomic clines
负责人:
关键词:
Bayesian inference;hybridization;Population Genetics - Theoretical;speciation
DOI:
doi:10.5061/dryad.8623
摘要:
as a function of genome-wide admixture. "Outlier" loci with extreme patterns of introgression relative to most of the genome can be identified. These loci are po
Data from: Detecting the anomaly zone in species trees and evidence for a misleading signal in higher-level skink phylogeny (Squamata: Scincidae)
负责人:
关键词:
sequence capture;incomplete lineage sorting;ultraconserved elements;UCE;IDBA;phylogenetics;probes;anomalous gene trees
DOI:
doi:10.5061/dryad.sf6s9
摘要:
dae to investigate whether nodes that are difficult to resolve place the species tree within the anomaly zone. We analyze new phylogenomic data (429 loci), using bot
Data from: A call for more transparent reporting of error rates: the quality of AFLP data in ecological and evolutionary research
负责人:
关键词:
amplified fragment length polymorphsim (AFLP);population genetics;publishing standards;genotyping error rate;reproducibility;replicate samples
DOI:
doi:10.5061/dryad.47sd5
摘要:
us-selection protocols can generate data sets varying widely in genotyping error rate, the number of loci used and potentially estimates of genetic diver
Data from: Genomic evidence for ecological divergence against a background of population homogeneity in the marine snail Chlorostoma funebralis
负责人:
关键词:
Molluscs;ecological divergence;RAD sequencing;Adaptation;rocky intertidal
DOI:
doi:10.5061/dryad.g9k62
摘要:
age FST = 0.0042). However, outlier tests revealed 34 loci putatively under divergent selection between northern and southern populations, and structure
Data from: Large-scale genotyping of highly polymorphic loci by next generation sequencing: how to overcome the challenges to reliably genotype individuals?
负责人:
关键词:
post-processing;parentage relationships;Marmota marmota;high throughput sequencing;non-model species;Holocene;Alpine marmot
DOI:
doi:10.5061/dryad.rp7n9
摘要:
d at four MHC loci for 863 Alpine marmots with a genotype assignment error rate estimated as 0.21%. The proposed methodology could be appli

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