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Data from: Diversity and phylogenetic analysis of endosymbiotic bacteria of the date palm root borer Oryctes agamemnon (Coleoptera: Scarabaeidae)
负责人:
关键词:
Cellulomonas;diversity;phylogenetics;Oryctes agamemnon;Shewanella;Allomonas;Citrobacter;Photobacterium;vibrio
DOI:
doi:10.5061/dryad.59h51
摘要:
r insect host can lead to development of new insect pest control strategies. Results Metagenomic DNA from larval midgut of the date palm root borer
Data from: Amplicon pyrosequencing reveals the soil microbial diversity associated with invasive Japanese barberry (Berberis thunbergii DC.)
负责人:
关键词:
metagenomics;Berberis thunbergii;bacteria;Bioinfomatics\/Phyloinfomatics;invasive species;Angiosperms
DOI:
doi:10.5061/dryad.68k7g
摘要:
the soil microbial communities and soil biochemistry affecting bioremediation efforts and future plant communities. Here, we used tag-encoded FLX amplicon 454 pyrosequencing
Data from: Gut microflora may facilitate adaptation to anthropic habitat: a comparative study in Rattus
负责人:
关键词:
physiological plasticity;intestinal microflora;Rattus rattus;16S metagenomics;anthropo-dependent;Rattus satarae
DOI:
doi:10.5061/dryad.5gj7056
摘要:
e was significant geographic variation in the microflora of the non-commensal R. satarae, there was no effect of geographic distance on gut mic
Data from: Minimizing the average distance to a closest leaf in a phylogenetic tree
负责人:
关键词:
mass transport;Taxon Selection;optimization;metagenomics;phylogenetic placement;phylogenetic diversity
DOI:
doi:10.5061/dryad.md023
摘要:
tree” sequences for phylogenetic placement of metagenomic reads. In this paper we formalize these problems in terms of the minimi
Data from: Shotgun microbial profiling of fossil remains
负责人:
关键词:
Environmental DNA;metagenomics;bacteria;Ecological Genetics
DOI:
doi:10.5061/dryad.r0056
摘要:
the specimen of interest, but instead reflect environmental organisms that colonized the specimen after death. Here, we characterize the mic
Data from: Dietary specialization in mutualistic acacia-ants affects relative abundance but not identity of host-associated bacteria
负责人:
关键词:
acacia-ants;Pseudomyrmex;Tokpelaia;Formicidae;metagenomics;microbiome;Vachellia
DOI:
doi:10.5061/dryad.gg6n17s
摘要:
d not experimentally test for a nutritional benefit to hosts of these bacterial lineages, metagenomic analysis reveals a Bartonella relative with an intact nitroge
Data from: Reintroduction of locally extinct vertebrates impacts arid soil fungal communities
负责人:
关键词:
Metagenomics Environmental DNA Fungi Species Interactions Invasive Species
DOI:
doi:10.5061/dryad.g1q85
摘要:
or reintroduced native vertebrates after controlling for the effect of habitat. Several fungal operational taxonomic units (OTUs) found exclusively inside
Data from: Genetic signatures of ecological diversity along an urbanization gradient
负责人:
关键词:
Recent;Metabarcoding;molecular ecology;metagenomics;environmental impact assessment;Estuarine;Holocene;Marine
DOI:
doi:10.5061/dryad.04tq4
摘要:
, and taxonomic scales. Here, we demonstrate the utility of environmental DNA (eDNA) for quantifying associations between human land use and changes in an adjacent
Data from: Characterizing DNA preservation in degraded specimens of Amara alpina (Carabidae: Coleoptera)
负责人:
关键词:
metagenomics;Late Pleistocene;Quaternary;Coleoptera;Insecta;shotgun sequencing;Carabidae;ancient DNA;Recent;DNA preservation;Wolbachia;museum DNA;Spiroplasma;Holocene;Amara alpina
DOI:
doi:10.5061/dryad.0179t
摘要:
e significantly longer than those of nuclear DNA in both museum and ancient specimens. Metagenomic characterisation of extracted DNA demonstrated tha

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