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Data from: Robust regression and posterior predictive simulation increase power to detect early bursts of trait evolution
负责人:
关键词:
Predictive Simulations;early burst;Comparative Methods;Adaptive Radiations;Quantitative Characters
DOI:
doi:10.5061/dryad.sp521
摘要:
t they outperform maximum likelihood approaches at identifying early bursts at moderate strength. Second, we use a robust regression procedure that allows
Data from: Generic recircumscriptions of Oncidiinae (Orchidaceae: Cymbidieae) based on maximum likelihood analysis of combined DNA datasets
负责人:
关键词:
euglossine pollination;Oncidiinae;Oncidium;Orchidaceae;elaiophores;hummingbird pollination;mimicry;nrITS;trnH-psbA \u2013 ycf1;matK;neotropics;oil-collecting bees
DOI:
doi:10.5061/dryad.2rk39
摘要:
Phylogenetic relationships within the orchid subtribe Oncidiinae sensu Chase were inferred using maximum likelihood analyses of single and multilocus
Data from: Modeling site heterogeneity with posterior mean site frequency profiles accelerates accurate phylogenomic estimation
负责人:
关键词:
long-branch repulsion;long-branch repel;site heterogeneity;long-branch attraction;maximum likelihood;mixture model;posterior mean site frequency
DOI:
doi:10.5061/dryad.gv1q5
摘要:
-heterogeneous mixture models have been developed to address this problem in both Bayesian and maximum likelihood (ML) frameworks, their formidable
Data from: Phylogenomics and the evolution of hemipteroid insects
负责人:
关键词:
Psocodea;Paraneoptera;phylogeny;transcriptomes;systematics;Hemiptera;Thysanoptera
DOI:
doi:10.5061/dryad.t4f4g85
摘要:
. Previous phylogenetic analyses have not consistently resolved the relationships among major hemipteroid lineages. We provide maximum likelihood-based
Data from: Effectiveness of phylogenomic data and coalescent species-tree methods for resolving difficult nodes in the phylogeny of advanced snakes
负责人:
关键词:
systematics;Serpentes
DOI:
doi:10.5061/dryad.rb5nc
摘要:
with ?100% coverage (?0% missing data) for 31 major lineages. We estimate phylogenies using neighbor joining, maximum parsimony, maximum likelihood, and thr
methods
负责人:
关键词:
Total Evidence;polytomy;Triplec;supermatrix rooted triplets;Galliformes;Phasianidae;gene tree estimation error;supermatrix rooted triples
DOI:
doi:10.5061/dryad.p1m52
摘要:
- Maximum Likelihood (SMRT-ML), a concatenation method that is consistent even when gene trees exhibit topological differences due to the multispecies coalescent
Data from: Estimating genotyping errors from genotype and reconstructed pedigree data
负责人:
关键词:
DOI:
doi:10.5061/dryad.vv0gg
摘要:
le from natural populations in the wild. 3. I proposed a maximum likelihood method to reconstruct pedigrees from genotype data with errors occurring
Data from: Evolution and Phylogeny of the Diptera: A Molecular Phylogenetic Analysis Using 28S rDNA Sequences
负责人:
关键词:
maximum likelihood ratio test;Drosophila;ribosomal DNA;molecular phylogeny;Evolution;systematics;character state polarity;Diptera
DOI:
doi:10.5061/dryad.788
摘要:
neages. Tree reconstruction was carried out with the neighbor joining, maximum parsimony, and maximum likelihood methods. Four major subgroups are consistently and r
Data from: Resolving conflict in eutherian mammal phylogeny using phylogenomics and the multispecies coalescent model
负责人:
关键词:
Mammals;cds sequences of 447 genes used in the study
DOI:
doi:10.5061/dryad.3629v
摘要:
and the relationships within Euarchontoglires and Laurasiatheria. Both Bayesian and maximum-likelihood analysis of genome-wide data of 447 nuclear genes from 37 species

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