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Data from: A portrait of a sucker using landscape genetics: how colonization and life history undermine the idealized dendritic metapopulation
负责人:
关键词:
migration-drift equilibrium;conservation;generation time;Catostomus catostomus;colonization history;Landscape Genetics;dendritic metapopulation
DOI:
doi:10.5061/dryad.5n7f6
摘要:
Dendritic metapopulations have been attributed unique properties by in silico studies, including an elevated genetic diversity relative
Data from: Substantial differences in bias between single-digest and double-digest RAD-seq libraries: a case study
负责人:
关键词:
selection components analysis;Syngnathus scovelli;Next-generation sequencing;allele dropout;PCR duplicates
DOI:
doi:10.5061/dryad.qf916
摘要:
ween the two protocols, as did the results of selection components analysis. We also performed an in silico digestion of the Gulf pipefish genome and modelled five major
Data from: Identification and validation of single nucleotide polymorphisms as tools to detect hybridization and population structure in freshwater
负责人:
关键词:
genetic fish;conservation tools;NGS techniques;SNPs;hybridization;Potamotrygon
DOI:
doi:10.5061/dryad.1pq21
摘要:
n read length 289 ± 183 bp) detecting a total of 5399 contigs (mean contig length: 396 ± 91 bp). Mining this data set, a panel of 143 in silico SNPs
Data from: Genetic sex assignment in wild populations using GBS data: a statistical threshold approach
负责人:
关键词:
Genotyping by-sequencing;Next-generation sequencing;Y chromosome;reduced representation sequencing;Arctocephalus forsteri;sex-specific markers
DOI:
doi:10.5061/dryad.84v2f
摘要:
gnment threshold (SSAT) to confidently assign sex in silico the presence or absence of significantly male-specific loci to individuals in our dataset treated
Data from: Simulated annealing approach to vascular structure with application to the coronary arteries
负责人:
关键词:
Cardiovascular systems;Simulated Annealling;optimisation;Vascular modelling
DOI:
doi:10.5061/dryad.59s7t
摘要:
geometries. We demonstrate that the approach can generate in silico vasculatures which closely match porcine anatomical data for the coronary arteries on al
Wildlife sequences of islet amyloid polypeptide (IAPP) identify critical species variants for fibrillization
负责人:
关键词:
Information and Computing Sciences Biological Sciences Ecology Chemistry Earth and Environmental Sciences Molecular Biology Biochemistry Biophysics
DOI:
doi:10.6084/m9.figshare.1568456.v1
摘要:
) was designed to study the amyloid formation using in silico analysis and in vitro assays. Amyloid formation was impeded when the NFLVH motif
Data from: Deconstruction of archaeal genome depict strategic consensus in core pathways coding sequence assembly
负责人:
关键词:
metabolic pathway;codon context;Archaea;codon usage
DOI:
doi:10.5061/dryad.sv70f
摘要:
A comprehensive in silico analysis of 71 species representing the different taxonomic classes and physiological genre of the domain Archaea
Data from: Non-specific amplification compromises environmental DNA metabarcoding with COI
负责人:
关键词:
Environmental DNA;12S;Metabarcoding;Actinopterygii;COI;eDNA;primer design
DOI:
doi:10.5061/dryad.b8f6s44
摘要:
ng a case study of marine and freshwater fishes from the British Isles, we quantify the in silico performance of twelve mitochondrial primer pairs from COI
Data from: Heterochromatin-enriched assemblies reveal the sequence and organization of the Drosophila melanogaster Y chromosome
负责人:
关键词:
Drosophila melanogaster genome;Rochester;gene duplications;Y chromosome;long read assembly;gene conversion;drosophila melanogaster;crystal-Stellate
DOI:
doi:10.5061/dryad.q91784t
摘要:
, we develop an assembly strategy involving the in silico enrichment of heterochromatic long single-molecule reads and use these reads to create targeted de novo
Data from: The choice of universal primers and the characteristics of the species mixture determines when DNA metabarcoding can be quantitative.
负责人:
关键词:
Environmental DNA;insects;in silico PCR;Primer bias;COI;Diet Analysis
DOI:
doi:10.5061/dryad.q2r3b1f
摘要:
the metabarcoding to be quantitative. In conclusion, depending on the primer pair used in the PCR amplification and on the characteristics of the mixture analysed

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