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Data from: Targeted sampling and target capture: assessing phylogeographic concordance with genome-wide data
负责人:
关键词:
hybrid enrichment;Hyla cinerea;discordance;Anaxyrus terrestris;Pliocene;Lithobates sphenocephalus;mitogenome;Hyla squirella;Rana sphenocephala;frogs;barrier testing;phylogenomics;Amphibians;Pleistocene
DOI:
doi:10.5061/dryad.1qt0k
摘要:
. To fully address each aspect of concordance, we combined target capture of a set of orthologous loci with targeted geographic sampling of multiple species
Data from: Restructuring higher taxonomy using broad-scale phylogenomics: the living Ophiuroidea
负责人:
关键词:
exon capture;Deep sea;Marine;Mezozoic;Temporal-banding;Ophiuroidea;Invertebrates;Cenozoic;Post-Paleozoic;phylogenomics
DOI:
doi:10.5061/dryad.rb334
摘要:
species spread across the known taxonomic diversity. The topology of the major lineages was robust to taxon sampling, exon-sampling, models and methods
Data from: A temporal banding approach for consistent taxonomic ranking above the species level
负责人:
关键词:
DOI:
doi:10.5061/dryad.p8n72
摘要:
Parmeliaceae. To assess its performance, we simulated the effect of taxon sampling and compared our method with the other temporal banding method
Data from: Woody flora types to describe phytogeographic units: an insight along a west–east transect in central Italy
负责人:
关键词:
higher taxon-approach;distribution patterns;Transition zone
DOI:
doi:10.5061/dryad.4qt17
摘要:
stratified sampling design. A total of 1710 occurrence data, 138 species, and 74 genera from 153 floristic relevés was used. The congruence in species and genera
Data from: Inclusive taxon sampling suggests a single, stepwise origin of ectolecithality in Platyhelminthes
负责人:
关键词:
Recent;Euneoophora;Platyhelminthes;implied weighting;Gnosonesimida;Lecithoepitheliata;Neoophora;heterotachy;phylogenetics;mixture model;Prorhynchida
DOI:
doi:10.5061/dryad.nh31f
摘要:
in taxon sampling. Accordingly, we present a molecular phylogeny focused on resolving the deepest divergences among the free-living Platyhelminthes. Species wer
Data from: Exploring evolutionary relationships across the genome using topology weighting
负责人:
关键词:
incomplete lineage sorting;Neurospora;population genomics;Heliconius;introgression;phylogenomics
DOI:
doi:10.5061/dryad.4jm83
摘要:
ch 'taxon topology' to the full tree. We describe our method for topology weighting by iterative sampling of sub-trees (Twisst), and test it on both simulated
Data from: Estimating belowground plant abundance with DNA metabarcoding
负责人:
关键词:
sequence;plant abundance;Stipa pennata;DNA metabarcoding;Mediterranean shubland;coexistence;Thymus vulgaris;root biomass;Helianthemum cinereum;Bupleurum fruticescens;Linum suffruticosum
DOI:
doi:10.5061/dryad.dm4t39t
摘要:
e multiple species are computationally identified in bulk samples, can help overcome the logistical limitations involved in sampling
Data from: PER-SIMPER - a new tool for inferring community assembly processes from taxon occurrences
负责人:
关键词:
SIMPER analysis;null model;Dispersal;niche;community assembly process
DOI:
doi:10.5061/dryad.q5n39p4
摘要:
sets. Sensitivity analysis further allows evaluation of its accuracy and robustness to sampling effort, including reduced numbers of sampled localities and/or species
Data from: Origin of land plants revisited in the light of sequence contamination and missing data
负责人:
关键词:
Coleochaetales;missing data;phylogenomics;contamination;Zygnematales
DOI:
doi:10.5061/dryad.hb5b0
摘要:
cation or horizontal gene transfer. In such cases, the solution resides in improved taxon sampling and sophisticated models of evolution. However, we will show tha
Data from: Phylogenomic insights into the evolution of stinging wasps and the origins of ants and bees
负责人:
关键词:
Mesozoic;Next-generation sequencing;ultraconserved elements;social insects;Anthophila;Hymenoptera;taxon sampling;Cenozoic;molecular systematics;phylogenomics;Aculeata;Apocrita
DOI:
doi:10.5061/dryad.r8d4q
摘要:
ng stinging wasp families, gathering sequence data from > 800 UCE loci and 187 samples, including 30 out of 31 aculeate families. We analyzed the 187-taxon

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