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Data from: Resolving rapid radiations within angiosperm families using anchored phylogenomics
负责人:
关键词:
Scirpeae;Trichophorum;Dulichieae;low-copy nuclear genes;low-level phylogenetics;Eriophorum;Scirpus;Khaosokia;Amphiscirpus;Cariceae;flowering plants;universal hybrid enrichment probes;Coalescent species tree;Carex;Calliscirpus
DOI:
doi:10.5061/dryad.55h30
摘要:
phylogenomics in angiosperms, we presented flowering plant-specific anchored enrichment probes for hundreds of conserved nuclear genes and demonstrated their use
Data from: Direct and indirect genetic effects of sex-specific mitonuclear epistasis on reproductive ageing
负责人:
关键词:
DOI:
doi:10.5061/dryad.6v79q
摘要:
Mitochondria are involved in ageing and their function requires coordinated action of both mitochondrial and nuclear genes. Epistasis bet
Data from: Species tree estimation of North American chorus frogs (Hylidae: Pseudacris) with parallel tagged amplicon sequencing
负责人:
关键词:
reduced representation library;Pseudacris;anonymous nuclear locus;phylogenetics;targeted amplicon sequencing;high-throughput sequencing
DOI:
doi:10.5061/dryad.23rc0
摘要:
of this technology for phylogenetic studies, which often include a relatively small portion of the genome but several taxa, requires strategies for genome par
Data from: Using targeted enrichment of nuclear genes to increase phylogenetic resolution in the neotropical rain forest genus Inga (Leguminosae
负责人:
关键词:
hybrid capture;Next-generation sequencing;Radiation;population genomics;Mimosoideae;targeted enrichment;Inga;phylogenomics
DOI:
doi:10.5061/dryad.r9c12
摘要:
. The neotropical tree genus Inga (Leguminosae) is a good example, with ~300 extant species and a crown age of 2-10 MY, yet over 6kb of plastid and nuclear
Data from: More taxa or more characters revisited: combining data from nuclear protein-encoding genes for phylogenetic analyses of Noctuoidea
负责人:
关键词:
combining data;Noctuidae;Noctuoidea;taxon sampling;independent genes
DOI:
doi:10.5061/dryad.558
摘要:
ng empirical data from noctuoid moths, one of the largest superfamilies of insects. Separate studies of two nuclear genes, elongation factor-1? (EF
Data from: Whole plastome sequencing reveals deep plastid divergence and cytonuclear discordance between closely related balsam poplar
负责人:
关键词:
Natural Selection and Contemporary Evolution Molecular Evolution Speciation Genomics/Proteomics
DOI:
doi:10.5061/dryad.nj5h5
摘要:
As molecular phylogenetic analyses incorporate ever-greater numbers of loci, cases of cytonuclear discordance – the phenomenon in which nuclear gene trees
Data from: Multilocus coalescence analyses support a mtDNA-based phylogeographic history for a widespread Palearctic passerine bird, Sitta europaea
负责人:
关键词:
Coalescent Theory;phylogeography;Selection - Natural;Pleistocene;Sitta europaea
DOI:
doi:10.5061/dryad.nf91079h
摘要:
h as divergence time and population expansion. We recommend that phylogeographic studies should be based on both mtDNA and nuclear genes.
Data from: A reassessment of explanations for discordant introgressions of mitochondrial and nuclear genomes
负责人:
关键词:
introgressive hybridization;secondary contact;isolation by distance;gene flow;Individual-based simulations;mito-nuclear discordance
DOI:
doi:10.5061/dryad.44sv0
摘要:
positive selection for introgressing mitochondrial variants, several types of sex-biases, drift, negative selection against introgression in the nuclear genome
Data from: Ancestral gene flow and parallel organellar genome capture result in extreme phylogenomic discord in a lineage of angiosperms
负责人:
关键词:
Recent;Chloroplast capture;Reticulation;Incongruence;Heuchera;Angiosperm;Ancient hybridization;Saxifragales;Saxifragaceae;phylogenomics
DOI:
doi:10.5061/dryad.cd546
摘要:
of three primary clades with relationships extensively rearranged within these as well. A minority of nuclear loci also exhibit phylogenetic discord
Data from: Potentially adaptive mitochondrial haplotypes as a tool to identify divergent nuclear loci
负责人:
关键词:
DOI:
doi:10.5061/dryad.0s3t5
摘要:
nuclear genes and there is substantial interaction between nuclear and mitochondrial expressed gene products. Recent studies report adaptive var

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