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Data from: An evaluation of the hybrid speciation hypothesis for Xiphophorus clemenciae based on whole genome sequences
负责人:
Schumer, Molly
关键词:
Hybridization Introgression next-generation sequencing sexual selection incomplete lineage sorting
DOI:
doi:10.5061/dryad.6k7gh
摘要:
on in the genome of a putative hybrid species, Xiphophorus clemenciae, through whole genome sequencing of this species and its hypothesized progenitors. Base
Data from: Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
负责人:
关键词:
DNA Barcoding;metagenomics;Bacillariophyta;diatoms;Algae;Community Ecology
DOI:
doi:10.5061/dryad.370nq
摘要:
The recent emergence of barcoding approaches coupled to those of Next Generation Sequencing (NGS) have raised new perspectives for studying
Data from: Inferring the mode of origin of polyploid species from next-generation sequence data
负责人:
关键词:
approximate Bayesian computation;Capsella;Polyploidization;Disomic inheritance;speciation
DOI:
doi:10.5061/dryad.g611t
摘要:
on (ABC), applied to realistic traditional and next-generation sequence data, allows correct inference of the evolutionary and demogra
Data from: Efficient detection of novel nuclear markers for Brassicaceae by transcriptome sequencing
负责人:
关键词:
Primer-design;Arabidopsis thaliana;primer database;Next-generation sequencing;RNA-seq;phylogenetics;Cardamine hirsuta;Arabis alpina;454 transcriptome sequencing;Brassicaceae
DOI:
doi:10.5061/dryad.63j2j
摘要:
of molecular polymorphisms in nuclear markers. Next-generation sequencing (NGS) techniques nowadays provide a powerful approach to overcome this limitation. We present
Data from: Next-generation museum genomics: phylogenetic relationships among palpimanoid spiders using sequence capture techniques (Arane
负责人:
关键词:
Mecysmaucheniidae;Araneomorphae;Huttoniidae;Stenochilidae;Palpimanidae;Archaeidae;ultra conserved elements;exon;ethanol
DOI:
doi:10.5061/dryad.387c58v
摘要:
techniques difficult to impossible for many specimens. Recent advances in Next-Generation Sequencing, specifically target capture, makes use of short
Data from: A framework phylogeny of the American oak clade based on sequenced RAD data
负责人:
关键词:
Expressed sequence tags (EST);Quercus;Next-generation sequencing;plant systematics;Fagaceae;restriction-site associated DNA;partitioned RAD;phylogenomics
DOI:
doi:10.5061/dryad.ts2hj
摘要:
e, we utilize next-generation sequencing of restriction-site associated DNA (RAD-Seq) to resolve a framework phylogeny of a predominantly American clade of oaks
Data from: Kicking Triturus arntzeni when it’s down: large-scale nuclear genetic data confirm that newts from the type locality are geneti
负责人:
关键词:
Triturus ivanbureschi;Next-generation sequencing;Ion Torrent;Triturus macedonicus;DNA degradation;Triturus cristatus superspecies
DOI:
doi:10.5061/dryad.g3375
摘要:
We collected nuclear DNA data (52 markers) with next-generation sequencing for nine Triturus newt specimens, including the holotype
ican bumble bees using RAD sequencing
负责人:
关键词:
conservation genetics;Bumble bee;Genomics\/Proteomics;insects;Bombus pensylvanicus;Bombus impatiens;RADtag;genetic diversity;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.12j05
摘要:
these discrepancies and to investigate the best ways to integrate next-generation sequencing data and more traditional molecular markers in studies
Data from: Less is more: extreme genome complexity reduction with ddRAD using Ion Torrent semiconductor technology
负责人:
关键词:
Eurasian perch SNP development and validation de novo assembly next-generation sequencing population genomics DNA pooling
DOI:
doi:10.5061/dryad.s2405
摘要:
Massively parallel sequencing a small proportion of the whole genome at high coverage enables answering a wide range of questions from
Data from: Double-digest RAD Sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with non-model organisms
负责人:
关键词:
Genomics\/Proteomics;Natural Selection and Contemporary Evolution;phylogeography;molecular evolution;quantitative genetics;Ecological Genetics
DOI:
doi:10.5061/dryad.7tb72
摘要:
library. We filtered the genomic data using Stacks, a bioinformatic tool to process RAD sequencing data. On average, we obtained ~11 000 polymorphic loci per

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