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Data from: Genome-scale phylogenetic analysis finds extensive gene transfer among fungi
负责人:
关键词:
birth\u2013death models;gene transfer;gene tree-species tree;gene duplication;genomics;statistics
DOI:
doi:10.5061/dryad.r2t49
摘要:
among eukaryotes. To explore this hypothesis, we compare the dynamics of genome evolution in two groups of organisms: cyanobacteria and fungi. Ancestral
Data from: Population structure of mycobionts and photobionts of the widespread lichen Cetraria aculeata
负责人:
关键词:
phylogeography;Trebouxia jamesii;photobiont selection;lichens;Cetraria aculeata;polar lichens
DOI:
doi:10.5061/dryad.8531
摘要:
Lichens are symbioses between fungi (mycobionts) and photoautotrophic green algae or cyanobacteria (photobionts). Many lichens occupy lar
Data from: Insights into the origin and evolution of plant sigma factors
负责人:
关键词:
phylogenetic analysis;Chloroplast;gene duplication;Evolution;sigma factor
DOI:
doi:10.5061/dryad.n8065tv
摘要:
phylogenetic analysis of SIG homologues from land plants and algae. Our results reveal that plants have acquired sigma factors from ancestor cyanobacteria via
Data from: Early photosynthetic eukaryotes inhabited low-salinity habitats
负责人:
关键词:
Cyanothece sp. PCC8801;Gloeomargarita lithophora;Volvox carteri nagariensis UTE2908;Fistulifera sp. JPCC DA0580;Pseudendoclonium akinetum;Pyramimonas parkeae;Precambrian;Anabaena cylindrica PCC7122;Photosynthetic eukaryotes;Cyanophora paradoxa;Prochlorococcus marinus str. MIT9515;Parachlorella kessleri;Synechococcus sp. WH8016;Synechococcus sp. PCC7002;Cyanidium caldarium;Cycas taitungensis;Pedinomonas minor;Chlamydomonas reinhardtii;Psilotum nudum;relaxed molecular clock.;Gloeobacter violaceus PCC7421;Prochloron didemni P2 Fiji;Anthoceros formosae;Mesoproterozoic;Thermosynechococcus elongatus BP1;Welwitschia mirabilis;Prasinoderma colonial;Pseudanabaena biceps PCC7429;Cyanothece sp. PCC7425;Angiopteris evecta;Cyanothece sp. PCC7424;Chlorokybus atmophyticus;Synechococcus sp. JA-3-3Ab;Coccomyxa sp. C169;Floydiella terrestris;Schizomeris leibleinii;Richelia intracellularis HH01;Microcystis aeruginosa NIES843 Micromonas sp. RCC299;Nodularia spumigena CCY9414;Porphyra purpurea;Adiantum capillus veneris;Buus microphylla;Calycanthus floridus;Nymphaea alba;Phaeodactylum tricornutum;Spinacia oleracea;Nodosilinea nodulosa PCC7104;Odontella sinensis;Chloroplast;Physcomitrella patens subsp patens;Great Oxidation Event;Aneura mirabilis;Cyanobacteria;Leptolyngbya sp. PCC7375;Synedra acus;Prochlorococcus marinus str. MIT9211;Cyanobium sp. PCC7001;Leptolyngbya sp. PCC7376;Verdigellas peltata;Bryopsis hypnoides;Gracilaria tenuistipitata;Synechococcus sp. RCC307;Ptilidium pulcherrimum;Prasinococcus sp. CCMP1194;Dunaliella salina;Nostoc azollae 0708;Ranunculus macranthus;Microcoleus vaginatus FGP2;Scenedesmus obliques;Synechococcus sp. PCC7335;Chaetosphaeridium globosum;Oscillatoria sp. PCC6506;Pseudanabaena sp. PCC7367;Raphidiopsis brookii D9;Richelia intracellularis HM01;Trichodesmium erythraeum IMS101;Prochloron didemni P3 Solomon;primary endosymbiotic event;Klebsormidium flaccidum;Acaryochloris marina MBIC11017;Arthrospira sp. PCC8005;Marchantia polymorpha;Staurastrum punctulatum;Coffea arabica;Porphyra yezoensis;Crocosphaera watsonii WH0003;Stigeoclonium helveticum;Pleurocapsa sp. PCC7327;Proterozoic;Gnetum parvifolium;Thalassiosira oceanica CCMP1005;Chara vulgaris;Leptosira terrestris;Cyanidioschyzon merolae strain 10D;Synechococcus sp. CB0101;Paulinella chromatophora;Nostoc punctiforme PCC73102;Pycnococcus provasolii;Illicium oligandrum;Prochlorococcus marinus str. AS9601;Nostoc sp. PCC7120;Fischerella sp. JSC11;Synechocystis sp. PCC6803;Cyanobium gracile PCC6307;Zygnema circumcarinatum;Microcoleus chthonoplastes PCC7420;Neoproterozoic;Pinus contorta;Calothrix sp. PCC6303;Ephedra equisetina;Synechococcus elongatus PCC6301;Amborella trichopoda;Cryptomeria japonica;Monomasti sp. OKE1;Pseudanabaena sp. PCC6802;phylogenomics;Lyngbya sp. PCC8106;Pre-Cambrian;Synechococcus sp. JA-2-3B'a(2-13);Oltmannsiellopsis viridis Oocystis solitaria SAG83 80;Syntrichia ruralis;Nephroselmis olivacea;Synechococcus sp. CC9605;Mesostigma viride;Ostreococcus tauri;Lyngbya majuscula 3L;Oedogonium cardiacum;Prochlorococcus marinus str. MIT9303;Cyanothece sp. CCY0110
DOI:
doi:10.5061/dryad.421p2
摘要:
, however, which Cyanobacteria are most closely related to the chloroplast, when the plastid lineage first evolved, and in what habitats this endosymbiotic
Data from: Variation in species light acquisition traits under fluctuating light regimes: implications for non?equilibrium coexistence
负责人:
关键词:
Non-equilibrium coexistence;Phytoplankton photoacclimation;Niche partitioning
DOI:
doi:10.5061/dryad.2rh61qk
摘要:
of dominant cyanobacteria (Anabaena flos-aquae, Microcystis spp.) and diatom (Aulacoseira granulata, Cyclotella pseudostelligera) species were character
Data from: Direct and indirect impacts of climate change on microbial and biocrust communities alter the resistance of the N cycle
负责人:
关键词:
mineralization;nitrogen cycling;fungal: bacterial ratio;amoA genes;warming;lichens;rainfall reduction
DOI:
doi:10.5061/dryad.vt84k
摘要:
the recognized importance of soil communities dominated by mosses, lichens and cyanobacteria (biocrusts) as a driver of nutrient cycling in drylands, littl
Data from: Efficient exploration of the space of reconciled gene trees
负责人:
关键词:
sequence simulation;Cyanobacteria;Gene tree reconciliation
DOI:
doi:10.5061/dryad.pv6df
摘要:
gene families from 36 cyanobacterial genomes we find that joint likelihood-based inference results in a striking reduction in apparent phylogenetic discord
Data from: Evidence for water-mediated mechanisms in coral–algal interactions
负责人:
关键词:
turf algae;coral reefs;coral-algal interactions;oxygen concentrations;water flow
DOI:
doi:10.5061/dryad.t8j15
摘要:
ow that coral (massive Porites) interfaces with thick turf algae, macroalgae, and cyanobacteria, which are successful competitors against coral
Data from: The predictability of a lake phytoplankton community, over time-scales of hours to years
负责人:
关键词:
cell density;Cyanobacteria;phytoplankton;time series;Flow cytometry;microscopy
DOI:
doi:10.5061/dryad.r4454
摘要:
m dataset lacking fine spatial resolution, from 0.46 at 1 month to 0.32 at 10 years. When cyanobacterial and eukaryotic algal cell density were examined separate

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