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Data from: Generative modeling of multi-mapping reads with mHi-C advances analysis of Hi-C studies
- 负责人：
- DOI：
- doi:10.5061/dryad.v7k3140
- 摘要：
- sets. Computational experiments highlighted that in Hi-C studies with short read lengths, mHi-C rescued multi-reads can emulate the effect of longer reads. mHi-C also reveal
Data from: Inferring heterogeneous evolutionary processes through time: from sequence substitution to phylogeography
- 负责人：
- DOI：
- doi:10.5061/dryad.qp747
- 摘要：
- Molecular phylogenetic and phylogeographic reconstructions generally assume time-homogeneous substitution processes. Motivated by computational
Data from: An integrative computational approach for a prioritization of key transcription regulators associated with nanomaterial-induced toxicity
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.3b025hh
- 摘要：
- on, a systems biology approach and data from high-throughput omics experiments can be used. We present a computational approach that combines reverse engineering
Data from: A versatile pipeline for the multi-scale digital reconstruction and quantitative analysis of 3D tissue architecture
- 负责人：
- DOI：
- doi:10.5061/dryad.m67r6
- 摘要：
- A prerequisite for the systems biology analysis of tissues is an accurate digital three-dimensional reconstruction of tissue structure based
Data from: Robustness of predictions of extremely thermally stable proteins in ancient organisms
- 负责人：
- DOI：
- doi:10.5061/dryad.mv185
- 摘要：
- A number of studies have addressed the environmental temperatures experienced by ancient life. Computational studies using a non-homogeneous
Data from: Towards improving searches for optimal phylogenies
- 负责人：
- DOI：
- doi:10.5061/dryad.89qf8
- 摘要：
- Finding the optimal evolutionary history for a set of taxa is a challenging computational problem, even when restricting possible soluti
Data from: Adaptive evolution and environmental durability jointly structure phylodynamic patterns in avian influenza viruses
- 负责人：
- DOI：
- doi:10.5061/dryad.8ct18
- 摘要：
- , the durability of subtypes in aquatic environments). Extending this analysis using a computational model demonstrated that virus durability may lead to long-term
Data from: A unified rheological model for cells and cellularised materials
- 负责人：
- DOI：
- doi:10.5061/dryad.s853qg7
- 摘要：
- similarities and differences in reported behaviour across experimental methods and research groups. It also sets the foundations for more accurate computational
Data from: Differentially expressed genes match bill morphology and plumage despite largely homogenous genomes in a Holarctic songbird
- 负责人：
- DOI：
- doi:10.5061/dryad.15rk0
- 摘要：
- city, but do not support a scenario of prolonged isolation and subsequent secondary contact. Together, these findings highlight ongoing theoretical and computational
Fully Bayesian Analysis of RNA-seq Counts for the Detection of Gene Expression Heterosis
- 负责人：
- 关键词：
- Biotechnology Genetics Molecular Biology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
- DOI：
- doi:10.6084/m9.figshare.6949499
- 摘要：
- parallelized Markov chain Monte Carlo algorithm ameliorates the computational burden. We use our method to detect gene expression heterosis in a two-hybrid plant
