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Data from: CHIIMP: an automated high-throughput microsatellite genotyping approach reveals greater allelic diversity in wild chimpanzees
负责人:
关键词:
microsatellites;chimpanzees;Pan troglodytes
DOI:
doi:10.5061/dryad.59j3974
摘要:
t microsatellite loci as a reference, we designed a bioinformatics platform that converts raw MiSeq reads into locus-specific files and automatically calls alleles aft
Data from: High-throughput microsatellite genotyping in ecology: improved accuracy, efficiency, standardization and success with low-quanti
负责人:
关键词:
faecal DNA;Ursus arctos;individual identification;parentage analysis;high-throughput sequencing;short tandem repeat (STR)
DOI:
doi:10.5061/dryad.18tg7
摘要:
to microsatellite sequences, allowing unambiguous allele identification and enabling automation of the genotyping process through bioinformatics. In addition, the ma
Data from: Double-digest RAD Sequencing using Ion Proton semiconductor platform (ddRADseq-ion) with non-model organisms
负责人:
关键词:
Genomics\/Proteomics;Natural Selection and Contemporary Evolution;phylogeography;molecular evolution;quantitative genetics;Ecological Genetics
DOI:
doi:10.5061/dryad.7tb72
摘要:
r library. We filtered the genomic data using Stacks, a bioinformatic tool to process RAD sequencing data. On average, we obtained ~11 000 polymorphic loci pe
Data from: Machine learning-based differential network analysis: a study of stress-responsive transcriptomes in Arabidopsis thaliana
负责人:
关键词:
Systems biology;Arabidopsis thaliana;abiotic\/environmental stress;differential network;bioinformatics;transcriptome analysis;gene coexpression network;Random Forest;Machine Learning
DOI:
doi:10.5061/dryad.41b9g
摘要:
prior to network construction, through learning the patterns of 32 expression characteristics of known stress-related genes. The retained “informati
Data from: Utility of pooled sequencing for association mapping in non-model organisms
负责人:
关键词:
conservation genetics;Genomics\/Proteomics;Oncorhynchus tshawytscha;Evolution of Sex;Fish;Bioinfomatics\/Phyloinfomatics;Adaptation
DOI:
doi:10.5061/dryad.85q6j
摘要:
for association mapping in model organisms, it has not been frequently utilized in natural populations. To extend bioinformatic tools for rapid implementation of Pool-Seq
Data from: Whole-chloroplast analysis as an approach for fine-tuning the preservation of a highly charismatic but critic
负责人:
关键词:
Wollemia nobilis;Araucariaceae;endangered species;rainforest tree;chloroplast genome;conservation genetics
DOI:
doi:10.5061/dryad.6908r
摘要:
ross the chloroplast using shotgun sequencing, bioinformatic extraction of chloroplast DNA and variant detection. Six chloroplast single nucleotide polymorphisms wer
Data from: A first look at the Oxford Nanopore MinION sequencer
负责人:
关键词:
Genomics\/Proteomics;nanopore sequencing;Next-generation sequencing;bioinformatics;Protobothrops flavoviridis
DOI:
doi:10.5061/dryad.5p0c3
摘要:
next-generation sequencing platforms. The MinION is an exciting step in a new direction for single-molecule sequencing, though it will require dramatic decreases
Data from: Insights into the roles of CMK-1 and OGT-1 in interstimulus interval-dependent habituation in Caenorhabditis elegans
负责人:
Rankin, Catharine
关键词:
OGT-1 CMK-1 Non-associative learning Habituation Mechanosensation Neurogenetics
DOI:
doi:10.5061/dryad.qg7kv6c
摘要:
characteristic of habituation remain unknown. In this article we use behavioral neurogenetic and bioinformatic analyses in the nematode Caenorhabiditis elegans

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