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Data from: Genomics of parallel experimental evolution in Drosophila
负责人:
关键词:
parallel evolution;Experimental evolution;generation time;single nucleotide polymorphism;Transposable elements;drosophila melanogaster;structural variant;pooled population resequencing;linkage disequilibrium
DOI:
doi:10.5061/dryad.4nc28
摘要:
of single-nucleotide polymorphisms, transposable elements, insertions, and structural variants, which was expected. Entirely unexpected was a high degree of para
Data from: Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus.
负责人:
关键词:
natural selection;Neurospora sublineolata;sequence alignments;Mating Systems;molecular evolution;Neurospora terricola;Neurospora tetrasperma;sel?ng;Mutations;Neurospora africana;Neurospora pannonica;Neurospora crassa;outcrossing;Neurospora discreta
DOI:
doi:10.5061/dryad.4n9b4
摘要:
-coding genes and for a reduced efficiency of transposable element silencing by Repeat Induced Point mutation. A reduction in adaptive evolution was also identified in the form
Data from: De novo assembly of the transcriptome of an invasive snail and its multiple ecological applications
负责人:
关键词:
Genomics\/Proteomics;Molluscs;Transcriptomics;phylogeography;invasive species;Pomacea canaliculata
DOI:
doi:10.5061/dryad.8n776
摘要:
bly of the transcriptome resulted in 128,436 unigenes with an average length of 419 bp (range: 150 to 8,556 bp). Many of the unigenes (2,439) contained transposable elements
Data from: Structure and extent of DNA methylation-based epigenetic variation in wild emmer wheat (T. turgidum ssp. dicoccoides) populations
负责人:
关键词:
biodiversity;Triticum dicoccoides;DNA methylation;Triticum turgidum ssp. dicoccoides;T. turgidum ssp. dicoccoides;Emmer wheat;Transposable elements
DOI:
doi:10.5061/dryad.g31cv
摘要:
the methylation status of random genomic CCGG sites and CCGG sites flanking transposable elements (TEs), respectively. Both techniques were applied to the DNA of 50
Data from: Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements
负责人:
关键词:
epigenome transcriptome DNA methylation phosphate starvation nutrient stress rice
DOI:
doi:10.5061/dryad.40gd6
摘要:
phosphate starvation and recovery conditions, we identified widespread phosphate starvation-induced changes in mC, preferentially localized in transposable elements (TEs
Data from: Differential effect of selection against LINE retrotransposons among vertebrates inferred from whole-genome data and demographic modeling
负责人:
关键词:
purifying selection;comparative population genomics;retrotransposons;Transposable elements;approximate Bayesian computation;composite likelihood optimization
DOI:
doi:10.5061/dryad.qd300cb
摘要:
Variation in LINE composition is one of the major determinants for the substantial size and structural differences among vertebrate genomes. In par
transposable elements"" data-category="" data-cropid="" data-dimen="" data-id="AB90F697-4891-436D-A5B8-0A04FBE9DBBF"> S1 Table from the paper "Genetic drift, not life history or RNAi, determine long term evolution of transposable elements"
负责人:
关键词:
Evolutionary Biology
DOI:
doi:10.6084/m9.figshare.2056071
摘要:
partenogene, apomict).
M3: Mating system information with three classes (gonochoristic, nonobligatory
sexual, apomict).
M2: Mating system inf
Data from: Comparative transcriptomics uncovers alternative splicing changes and signatures of selection from maize improvement
负责人:
关键词:
Zea mays ssp. mays;Alternative splicing;transcriptome;Zea mays ssp. parviglumis;biotic and abiotic stresses;Zea mays ssp. mexicana
DOI:
doi:10.5061/dryad.tk2fn
摘要:
in maize (4.12) was higher than that in teosinte (2.26). Moreover, 94 genes generating 98 retained introns with transposable element (TE) sequences wer
Data from: Horizontal gene acquisitions, mobile element proliferation, and genome decay in the host - restricted plant pathogen Erwinia tracheiphila
负责人:
Shapiro, Lori
关键词:
agriculture emerging infectious disease phage mobile DNA vector monomorphic host specialization
DOI:
doi:10.5061/dryad.v7h28
摘要:
ore, chromosomal rearrangements associated with phage and transposable element proliferation contributes to substantial differences in gene content and genetic architecture bet
Data from: Long live the queen, the king and the commoner? transcript expression differences between old and young in the termite Cryptotermes
负责人:
关键词:
Cryptotermes secundus;Termites;Aging;social insects;Differential transcript expression
DOI:
doi:10.5061/dryad.rs7d7q7
摘要:
in reproductives that was especially associated with DNA and protein damage and the activity of transposable elements. By contrast, workers seemed to be bet

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