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Data from: Evolutionary history as a driver of ecological networks: a case study of plant-hummingbird interactions
负责人:
关键词:
Gesneriaceae;Phaethornithinae;Acanthaceae;Trochilinae;likelihood analysis;Onagraceae;Bromeliaceae;Plant-pollinator;evolutionary isolation;Trochilidae
DOI:
doi:10.5061/dryad.3qq21
摘要:
ecological networks. We hypothesized different possible phylogenetic scenarios to predict frequencies of interactions between species by combining concepts from
Data from: Molecular phylogeny of rhynchonellide articulate brachiopods (Brachiopoda, Rhynchonellida)
负责人:
关键词:
Rhynchonelliformea;Palaeozoic;Holocene;phylogeny;Mesozoic
DOI:
doi:10.5061/dryad.79411
摘要:
We present here the first report based on phylogenetic analyses of small subunit (SSU/18S) and large subunit (LSU/28S) ribosomal DNA (rDNA) sequences
Source Code And Data Accompanying "Man Gave Names To All Those Animals"
负责人:
关键词:
historical linguistics animal names comparative historical linguistics evolutionary biology
DOI:
doi:10.5281/zenodo.1066534
摘要:
in the blog "The genealogical world of phylogenetic networks" (http://phylonetworks.blogspot.de/2017/10/man-gave-names-to-all-those-animals.html). This upload
Source Code And Data Accompanying "Man Gave Names To All Those Animals"
负责人:
关键词:
historical linguistics animal names comparative historical linguistics evolutionary biology
DOI:
doi:10.5281/zenodo.1066533
摘要:
in the blog "The genealogical world of phylogenetic networks" (http://phylonetworks.blogspot.de/2017/10/man-gave-names-to-all-those-animals.html). This upload
Data from: Parsimonious inference of hybridization in the presence of incomplete lineage sorting
负责人:
Nakhleh, Luay
关键词:
phylogenetic networks gene trees hybridization incomplete lineage sorting coalescent multi-labeled trees
DOI:
doi:10.5061/dryad.sr534
摘要:
a parsimony criterion for reconciling gene trees within the branches of a phylogenetic network, and a local search heuristic for inferring phylogenetic networks
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
ing of genomes and the runs of consecutive matches between the proteins were used to define phylogenetic relationships in the approach. We use
Data from: Evidence that hepatitis C virus genome partly controls infection outcome
负责人:
关键词:
Biomedicine;Phylogenetic Theory and Methods;Host Parasite Interactions;Evolutionary Medicine;Bioinfomatics\/Phyloinfomatics;Flaviviridae;Disease Biology;Hepacivirus
DOI:
doi:10.5061/dryad.3978f
摘要:
trait along a phylogenetic tree, use this data to quantify how infection outcomes cluster and ascertain the effect of virus genotype on these. We apply
Data from: Invading Africa: a novel transoceanic dispersal by a New World ant parasitoid
负责人:
关键词:
Neogene;Paleogene;Afrotropics;Quaternary;trans-Atlantic dispersal;neotropics;Cretaceous;Hymenoptera: Eucharitidae;historical biogeography;molecular dating;phylogeny;disjunct distribution;Kapala
DOI:
doi:10.5061/dryad.6m780
摘要:
phylogenetic relationships, molecular dating estimates, inter- and intraspecific genetic distances, morphology and geography. A phylogenetic analysis was performed using si
Data from: Displayed trees do not determine distinguishability under the network multispecies coalescent
负责人:
关键词:
Species tree;Gene tree;maximum likelihood;identifiability;phylogeny;rooted triple;hybridization;quartet
DOI:
doi:10.5061/dryad.t2d38
摘要:
ween species. Probabilistic models using the multispecies coalescent can be used in this framework for likelihood-based inference of both network topolog

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