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Data from: Robustness to divergence time underestimation when inferring species trees from estimated gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.65tn4
- 摘要：
- ons. We examine why the STEM tree (also called GLASS or Maximum Tree) is less accurate on estimated gene trees by comparing estimated and true coalescence times
Data from: The emergence of the lobsters: phylogenetic relationships, morphological evolution and divergence time comparisons of an ancient gr
- 负责人：
- DOI：
- doi:10.5061/dryad.4v875
- 摘要：
- ) and placement (deep, middle, shallow) on divergence time estimates. Results from our study suggest including at least 1 fossil per 10 operati
Data from: Coestimating reticulate phylogenies and gene trees from multilocus sequence data
- 负责人：
- Nakhleh, Luay
- 关键词：
- Multispecies network coalescent reticulation incomplete lineage sorting phylogenetic network Bayesian inference RJMCMC
- DOI：
- doi:10.5061/dryad.3h185
- 摘要：
- cular, we show that when gene flow occurs, our method accurately estimates the evolutionary histories, coalescence times, and divergence times. Tree
Data from: The impact of fossil stratigraphic ranges on tip?calibration, and the accuracy and precision of divergence time estimates
- 负责人：
- DOI：
- doi:10.5061/dryad.7kh57t5
- 摘要：
- . The results of our simulations show that using different calibration approaches leads to different divergence?time estimates and demonstrate tha
Data from: The efficacy of consensus tree methods for summarising phylogenetic relationships from a posterior sample of trees estimated from
- 负责人：
- 关键词：
- consensus trees;total-evidence dating;morphology;Bayesian phylogenetics;divergence time estimation
- DOI：
- doi:10.5061/dryad.66s9h
- 摘要：
- on of estimated parameters such as topology, branch lengths and divergence times. Numerous consensus tree construction methods are available, each presenting a di
Data from: Pleistocene speciation in the genus Populus (Salicaceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.766tk8qj
- 摘要：
- a and P. trichocarpa to produce coalescent-based estimates of the divergence time between the two species. We coupled the coalescent analyses with paleodistributi
Data from: Estimating diversity through time using molecular phylogenies: old and species-poor frog families are the remnants of a diverse past.
- 负责人：
- DOI：
- doi:10.5061/dryad.4nr63
- 摘要：
- e we develop a robust probabilistic approach for estimating Diversity-Through-Time (DTT) curves and uncertainty around these estimates from phylogeneti
Data from: Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925
- 负责人：
- DOI：
- doi:10.5061/dryad.4v937
- 摘要：
- i. Estimation of divergence time and ancestral area suggests that V. stejnegeri originated at ~6.0 Ma in the late Miocene on the Yunnan–Guizhou Plate
Data from: A journey on plate tectonics sheds light on European crayfish phylogeography
- 负责人：
- DOI：
- doi:10.5061/dryad.t72v91c
- 摘要：
- and to estimate the divergence time by employing both substitution rates and geological calibration methods. Our haplotype network reconstruction and phylogenetic analyses
Data from: Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term ge
- 负责人：
- DOI：
- doi:10.5061/dryad.t1b051ph
- 摘要：
- phylogeographic breaks between some of the investigated populations, and most of the methods assessed divergence time estimates predating the postulated bottleneck
