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Data from: Overcoming the challenge of small effective sample sizes in home-range estimation
负责人:
关键词:
Tapirus terrestris;Tracking Data;calibration data
DOI:
doi:10.5061/dryad.16bc7f2
摘要:
t cause substantial biases in home?range estimation. Specifically, the effective sample size of a range estimate is proportional to the number of observe
Data from: The impact of fossil stratigraphic ranges on tip?calibration, and the accuracy and precision of divergence time estimates
负责人:
关键词:
divergence time;molecular clock;Simulation;tip calibration;Ursidae;fossil
DOI:
doi:10.5061/dryad.7kh57t5
摘要:
. The results of our simulations show that using different calibration approaches leads to different divergence?time estimates and demonstrate tha
Data from: Pleistocene speciation in the genus Populus (Salicaceae)
负责人:
关键词:
Glaciation;isolation-with-migration;Species distribution model;Populus;Populus trichocarpa;MIMAR;Pleistocene;Salicaceae;Populus balsamifera
DOI:
doi:10.5061/dryad.766tk8qj
摘要:
a and P. trichocarpa to produce coalescent-based estimates of the divergence time between the two species. We coupled the coalescent analyses with paleodistributi
Data from: Coestimating reticulate phylogenies and gene trees from multilocus sequence data
负责人:
Nakhleh, Luay
关键词:
Multispecies network coalescent reticulation incomplete lineage sorting phylogenetic network Bayesian inference RJMCMC
DOI:
doi:10.5061/dryad.3h185
摘要:
cular, we show that when gene flow occurs, our method accurately estimates the evolutionary histories, coalescence times, and divergence times. Tree
Data from: Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
负责人:
关键词:
Demography;Bayesian;ancient DNA;mutation rate;coalescent simulation;heterochronous sequences
DOI:
doi:10.5061/dryad.1355
摘要:
for the estimation of substitution rates and divergence dates as an alternative to fossil and geological calibration. This comes at a time of growing interest
Data from: The efficacy of consensus tree methods for summarising phylogenetic relationships from a posterior sample of trees estimated from
负责人:
关键词:
consensus trees;total-evidence dating;morphology;Bayesian phylogenetics;divergence time estimation
DOI:
doi:10.5061/dryad.66s9h
摘要:
on of estimated parameters such as topology, branch lengths and divergence times. Numerous consensus tree construction methods are available, each presenting a di
Data from: Complex longitudinal diversification across South China and Vietnam in Stejneger's pit viper, Viridovipera stejnegeri (Schmidt, 1925
负责人:
关键词:
genetic diversity;venomous snake;Island;Viridovipera stejnegeri;Crotalinae;classification;phylogeography;Late Miocene
DOI:
doi:10.5061/dryad.4v937
摘要:
i. Estimation of divergence time and ancestral area suggests that V. stejnegeri originated at ~6.0 Ma in the late Miocene on the Yunnan–Guizhou Plate
Data from: A journey on plate tectonics sheds light on European crayfish phylogeography
负责人:
关键词:
divergence time analysis;Austropotamobius torrentium;phylogeography;Astacidea
DOI:
doi:10.5061/dryad.t72v91c
摘要:
and to estimate the divergence time by employing both substitution rates and geological calibration methods. Our haplotype network reconstruction and phylogenetic analyses
Data from: Phylogeography, genetic structure and population divergence time of cheetahs in Africa and Asia: evidence for long-term ge
负责人:
关键词:
divergence time;population genetics;Acinonyx jubatus;subspecies;Acinonyx jubatus soemmeringii;Holocene;Acinonyx jubatus jubatus;conservation genetics;phylogeography;Acinonyx jubatus venaticus
DOI:
doi:10.5061/dryad.t1b051ph
摘要:
phylogeographic breaks between some of the investigated populations, and most of the methods assessed divergence time estimates predating the postulated bottleneck
Data from: Estimating diversity through time using molecular phylogenies: old and species-poor frog families are the remnants of a diverse past.
负责人:
关键词:
diversity curves;extinction;anuran;phylogenetic comparative methods;Archaeobatrachia;diversification;Anurans;birth-death models
DOI:
doi:10.5061/dryad.4nr63
摘要:
e we develop a robust probabilistic approach for estimating Diversity-Through-Time (DTT) curves and uncertainty around these estimates from phylogeneti

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