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Data from: Modelling the probability of microhabitat formation on trees using cross-sectional data
负责人:
关键词:
Abies alba;tree microhabitats;Fagus sylvatica
DOI:
doi:10.5061/dryad.h85q3
摘要:
d the likelihood of the models, considering cross-sectional observations either of TreM presence/absence or TreM number on trees of different sizes. We calibrated
Data from: Coordinated dispersal and pre-Isthmian assembly of the Central American ichthyofauna
负责人:
关键词:
Parametric Biogeography;Paleocene-Late Neogene;Cichlidae;Poeciliidae;historical biogeography
DOI:
doi:10.5061/dryad.11cv0
摘要:
-rich clades of freshwater fishes in the Caribbean basin. Observed dispersal rate (DO) values were estimated from time-calibrated molecular phylogenies
Data from: Avian diversification patterns across the K-Pg boundary: influence of calibrations, datasets and model misspecification
负责人:
关键词:
Mesozoic;Divergence Dating;Paleontology;fossils;phylogeny;Cenozoic;Aves
DOI:
doi:10.5061/dryad.3c3r3
摘要:
may explain some discordance between previous divergence estimates based on different sequence types. Comparisons of fully calibrated and nominal
Data from: Diversification across the New World within the ‘blue’ cardinalids (Aves: Cardinalidae)
负责人:
关键词:
Cyanoloxia;ancestral area;Dispersal;Birds;Diversification rates;neotropics;Pliocene;phylogeography;Amaurospiza;Migration;Cyanocompsa;Miocene;Passerina;Spiza americana;Pleistocene
DOI:
doi:10.5061/dryad.tb50m
摘要:
sequence data (3193 base pairs from one mitochondrial and three nuclear genes) to infer phylogeographical structure and reconstruct time-calibrated species trees
Data from: Origin and hidden diversity within the poorly known Galápagos snake radiation (Serpentes: Dipsadidae)
负责人:
关键词:
Dipsadidae;Serpentes;molecular phylogeny;divergence time estimation;Pseudalsophis;island speciation
DOI:
doi:10.5061/dryad.18cg032
摘要:
calibrated tree for the group, based on a sampling of the major populations known to occur in the Archipelago. Our study revealed the presence of two pr
Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
the potential need for calibrating BFs and demonstrate that BFs used in this study are correctly calibrated.
Fully Bayesian Analysis of RNA-seq Counts for the Detection of Gene Expression Heterosis
负责人:
关键词:
Genetics Molecular Biology Biotechnology 69999 Biological Sciences not elsewhere classified 19999 Mathematical Sciences not elsewhere classified 110309 Infectious Diseases Plant Biology
DOI:
doi:10.6084/m9.figshare.6949499
摘要:
-breeding scenario, both in a real RNA-seq maize dataset and in simulation studies. In the simulation studies, we show our method has well-calibrated
Data from: Phylogenomics and historical biogeography of the monocot order Liliales: out of Australia and through Antarctica
负责人:
关键词:
DOI:
doi:10.5061/dryad.mc736
摘要:
of Liliales, and calibrated the resulting phylogeny against 17 fossil dates to produce a new timeline for monocot evolution. Liliales diverged from other
Data from: An integrated pathway for building regional phylogenies for ecological studies
负责人:
关键词:
metadata;Bayesian phylogenetics;DNA sequences;marine fishes;Actinopterygii;280 Million years;New Zealand;topological constraints;super-matrix;regional species pool;geo-referencing;community phylogenetics;Exclusive Economic Zone
DOI:
doi:10.5061/dryad.2v4h7bv
摘要:
-calibrated trees suitable to address ecological questions. The novel contributions of regPhylo include options to: use prior phylogenetic knowledge throug

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