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Data from: Spatio-temporal transcript profiling of rice roots and shoots in response to phosphate starvation and recovery
负责人:
关键词:
Rice phosphate starvation
DOI:
doi:10.5061/dryad.4480g
摘要:
annotation-based transcript assembly was also generated, identifying 438 unannotated loci that were differentially expressed under Pi starvation. Seve
Data from: The Solanum commersonii genome sequence provides insights into adaptation to stress conditions and genome evolution of wild potat
负责人:
Aversano, Riccardo
关键词:
DOI:
doi:10.5061/dryad.gf52g00
摘要:
on in heterozygosity (1.5% versus 53 to 59%), and differences in genome sizes were mainly due to variations in intergenic sequence length. Gene annotation by ab initi
Data from: Annotation of pseudogenic gene segments by massively parallel sequencing of rearranged lymphocyte receptor loci
负责人:
关键词:
DOI:
doi:10.5061/dryad.t47g3
摘要:
agrees with previously reported functional annotations. However, we identified novel non-functional alleles for several gene segments, some of which wer
Data from: SNP discovery in black cottonwood (Populus trichocarpa) by population transcriptome resequencing
负责人:
关键词:
xylem;mRNA;biofuels;Populus trichocarpa;Next Generation Sequencing
DOI:
doi:10.5061/dryad.7990
摘要:
e only 3% and 4% of sequence reads mapped. This suggests that the current annotation of the poplar genome is remarkably incomplete and that there are many transcripts
Data from: Genome-wide discovery and characterization of maize long non-coding RNAs
负责人:
关键词:
long noncoding RNAs;Zea mays;expression quantitative trait locus (eQTL);Maize;RNA based sequencing (RNA-seq)
DOI:
doi:10.5061/dryad.4sf33
摘要:
s: By exploiting available public ESTs, maize whole genome sequence annotation and RNA-seq datasets from 30 different experiments, we identified 20,163 putati
Data from: High-quality Avicennia marina genome and annotation
负责人:
关键词:
DOI:
doi:10.5061/dryad.3j9kd51f5
摘要:
protein-coding genes using tissue-specific RNA-seq data, from which 13,312 were associated to GO terms. Genome assembly and annotated set of genes yield a 96.7% and 92
Data from: Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene evolution in the Viannia subgenus
负责人:
关键词:
Infection;Leishmania Viannia naiffi;Leishmania;Leishmania (Viannia) guyanensis;genomics;Evolution;Comparative genomics;Leishmania (Viannia) naiffi
DOI:
doi:10.5061/dryad.4bm23
摘要:
e tested using short sequence reads for L. braziliensis M2904 against its published reference as a comparison. This assembly and annotation pipeline
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
负责人:
University Of Edinburgh;;University Of Edinburgh
关键词:
Transcriptome genome functional annotation FAANG sheep Ovis aries ruminant gene expression atlas transcription network Biological Sciences::Genetics
DOI:
doi:10.7488/ds/2112
摘要:
expression across multiple tissues has aided genome annotation and supported functional annotation of mammalian genes. We present a large-scale RNA-Seq data

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